Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CYCSP39-201ENST00000565821 309 ntBASIC2.53□□□□□ -2
PAX9P55771 MIR5692A1-201ENST00000580523 69 ntBASIC2.53□□□□□ -2
PAX9P55771 HMGN2P15-201ENST00000585707 270 ntBASIC2.53□□□□□ -2
PAX9P55771 BNIP3P25-201ENST00000596023 559 ntBASIC2.53□□□□□ -2
PAX9P55771 AL627309.6-201ENST00000606857 840 ntBASIC2.53□□□□□ -2
PAX9P55771 uc_338.25-201ENST00000613756 156 ntBASIC2.53□□□□□ -2
PAX9P55771 AL157817.1-201ENST00000614264 790 ntBASIC2.53□□□□□ -2
PAX9P55771 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.53□□□□□ -2
PAX9P55771 DUXAP9-208ENST00000622815 614 ntBASIC2.53□□□□□ -2
PAX9P55771 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.53□□□□□ -2
PAX9P55771 AC034229.5-201ENST00000624258 185 ntBASIC2.53□□□□□ -2
PAX9P55771 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2
PAX9P55771 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
PAX9P55771 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PAX9P55771 AC010680.1-201ENST00000590024 3590 ntBASIC2.53□□□□□ -2.01
PAX9P55771 AL049781.1-201ENST00000623195 3585 ntBASIC2.53□□□□□ -2.01
PAX9P55771 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PAX9P55771 Z83843.1-201ENST00000604070 3685 ntBASIC2.52□□□□□ -2.01
PAX9P55771 Y_RNA.86-201ENST00000363020 111 ntBASIC2.52□□□□□ -2.01
PAX9P55771 U3.12-201ENST00000364498 214 ntBASIC2.52□□□□□ -2.01
PAX9P55771 SNORD14B-201ENST00000364533 90 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PAX9P55771 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PAX9P55771 MIR200C-201ENST00000384980 68 ntBASIC2.52□□□□□ -2.01
PAX9P55771 MIR218-2-201ENST00000385006 110 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RNA5SP219-201ENST00000390940 113 ntBASIC2.52□□□□□ -2.01
PAX9P55771 PTMAP2-201ENST00000397627 327 ntBASIC2.52□□□□□ -2.01
PAX9P55771 MIR887-201ENST00000401258 79 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL356776.1-201ENST00000406574 447 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.52□□□□□ -2.01
PAX9P55771 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.52□□□□□ -2.01
PAX9P55771 RNA5SP118-201ENST00000410385 109 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RNU6-373P-201ENST00000411247 98 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RNU6-607P-201ENST00000411283 108 ntBASIC2.52□□□□□ -2.01
PAX9P55771 POLHP1-201ENST00000411806 470 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RPL26P27-201ENST00000414397 437 ntBASIC2.52□□□□□ -2.01
PAX9P55771 BMS1P22-201ENST00000414726 313 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RPS29P4-201ENST00000414733 161 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.52□□□□□ -2.01
PAX9P55771 AL139413.1-201ENST00000421309 217 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL139281.1-201ENST00000422120 335 ntBASIC2.52□□□□□ -2.01
PAX9P55771 HMGN2P30-201ENST00000423237 256 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL353729.1-201ENST00000425044 720 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.52□□□□□ -2.01
PAX9P55771 AC007560.1-201ENST00000426912 237 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC093151.1-201ENST00000427711 313 ntBASIC2.52□□□□□ -2.01
PAX9P55771 SAR1AP4-201ENST00000429225 591 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.52□□□□□ -2.01
PAX9P55771 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
PAX9P55771 PRPS1P1-201ENST00000445305 876 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL031183.1-201ENST00000457667 207 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC092798.1-201ENST00000458542 409 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RNU7-167P-201ENST00000459160 62 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC087884.1-201ENST00000469738 328 ntBASIC2.52□□□□□ -2.01
PAX9P55771 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.52□□□□□ -2.01
PAX9P55771 Y_RNA.654-201ENST00000497848 106 ntBASIC2.52□□□□□ -2.01
PAX9P55771 MTCO2P30-201ENST00000503662 364 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RNU6-1183P-201ENST00000517054 60 ntBASIC2.52□□□□□ -2.01
PAX9P55771 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.52□□□□□ -2.01
PAX9P55771 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.52□□□□□ -2.01
PAX9P55771 AC023050.3-201ENST00000541142 333 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC106782.4-201ENST00000568264 210 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC034105.4-201ENST00000568304 277 ntBASIC2.52□□□□□ -2.01
PAX9P55771 LRRC37A5P-203ENST00000580181 585 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.52□□□□□ -2.01
PAX9P55771 VN1R80P-201ENST00000597126 338 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.52□□□□□ -2.01
PAX9P55771 AL162713.1-201ENST00000604480 262 ntBASIC2.52□□□□□ -2.01
PAX9P55771 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.52□□□□□ -2.01
PAX9P55771 RMST_4.1-201ENST00000616886 107 ntBASIC2.52□□□□□ -2.01
PAX9P55771 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.52□□□□□ -2.01
PAX9P55771 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PAX9P55771 AC012442.3-202ENST00000636742 206 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC100810.6-201ENST00000638068 285 ntBASIC2.52□□□□□ -2.01
PAX9P55771 AC099654.14-201ENST00000638599 341 ntBASIC2.52□□□□□ -2.01
PAX9P55771 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PAX9P55771 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PAX9P55771 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
PAX9P55771 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PAX9P55771 AC091564.4-201ENST00000533934 2194 ntBASIC2.51□□□□□ -2.01
PAX9P55771 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.51□□□□□ -2.01
PAX9P55771 MIR412-201ENST00000362142 91 ntBASIC2.51□□□□□ -2.01
PAX9P55771 Y_RNA.88-201ENST00000363029 99 ntBASIC2.51□□□□□ -2.01
PAX9P55771 RNU6-799P-201ENST00000363567 107 ntBASIC2.51□□□□□ -2.01
PAX9P55771 Y_RNA.157-201ENST00000363638 102 ntBASIC2.51□□□□□ -2.01
PAX9P55771 RNU6-82P-201ENST00000363970 107 ntBASIC2.51□□□□□ -2.01
PAX9P55771 CD24P4-201ENST00000382840 243 ntBASIC2.51□□□□□ -2.01
PAX9P55771 RNY3P14-201ENST00000384309 102 ntBASIC2.51□□□□□ -2.01
PAX9P55771 RNU6-658P-201ENST00000384606 106 ntBASIC2.51□□□□□ -2.01
PAX9P55771 MT-TL1-201ENST00000386347 75 ntBASIC2.51□□□□□ -2.01
PAX9P55771 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PAX9P55771 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.51□□□□□ -2.01
PAX9P55771 MIR1289-1-201ENST00000408836 144 ntBASIC2.51□□□□□ -2.01
PAX9P55771 Y_RNA.623-201ENST00000411128 95 ntBASIC2.51□□□□□ -2.01
PAX9P55771 RNA5SP492-201ENST00000411330 114 ntBASIC2.51□□□□□ -2.01
PAX9P55771 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.51□□□□□ -2.01
PAX9P55771 MTATP6P23-201ENST00000440153 476 ntBASIC2.51□□□□□ -2.01
PAX9P55771 MTCO3P18-201ENST00000440206 761 ntBASIC2.51□□□□□ -2.01
PAX9P55771 MTATP6P7-201ENST00000453315 681 ntBASIC2.51□□□□□ -2.01
PAX9P55771 FTH1P2-201ENST00000466086 412 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms