Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC022140.2-201ENST00000623500 188 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 AC139792.3-201ENST00000623525 224 ntBASIC3.14□□□□□ -1.91
DDX43Q9NXZ2 CASC19-280ENST00000642102 1351 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RNU6-1085P-201ENST00000363576 107 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RNU6-169P-201ENST00000365336 107 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RPS4XP8-201ENST00000402039 771 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AL122016.1-201ENST00000403365 367 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC127391.1-201ENST00000411737 98 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RPL21P24-201ENST00000413752 448 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 USP9YP27-201ENST00000418455 438 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 ZNF863P-201ENST00000426746 417 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RPL23AP20-201ENST00000447965 421 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RPL37P4-201ENST00000448908 268 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 FDX1P2-201ENST00000450769 375 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 MTND3P10-201ENST00000450967 341 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RN7SL499P-201ENST00000481141 276 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC097462.2-201ENST00000504623 481 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC010587.1-201ENST00000505809 469 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RNU6-390P-201ENST00000516259 103 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC022616.3-201ENST00000523940 148 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 MTND1P35-201ENST00000526739 508 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC107016.2-201ENST00000547968 190 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AL137843.1-201ENST00000605078 385 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC008945.2-201ENST00000606056 604 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AC004852.3-201ENST00000614131 326 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 AL133173.2-201ENST00000614270 90 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 MTND1P37-201ENST00000636562 264 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
DDX43Q9NXZ2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 RNU6-797P-201ENST00000363101 109 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 SNORA80A-201ENST00000363922 136 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 RNU6-217P-201ENST00000384164 104 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 U3.26-201ENST00000391236 204 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 RNU2-8P-201ENST00000410727 190 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC007283.2-201ENST00000424739 197 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC107083.1-201ENST00000439643 279 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AL714022.1-201ENST00000439897 151 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 USP9YP15-201ENST00000442391 422 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AMD1P1-201ENST00000457220 922 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AP001486.1-201ENST00000463339 476 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AL049873.1-201ENST00000480540 376 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 RPL23AP41-201ENST00000484754 458 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 RN7SL633P-201ENST00000488974 297 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC010493.1-201ENST00000513479 292 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 RNU1-103P-201ENST00000516502 125 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC090572.1-201ENST00000519251 160 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 SUB1P2-201ENST00000556401 297 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 C8orf59P2-201ENST00000603441 271 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 BNIP3P9-201ENST00000603714 553 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AL136363.1-201ENST00000605349 337 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC093788.1-201ENST00000609356 927 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC005858.4-201ENST00000623191 700 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AP003122.5-201ENST00000527668 3766 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 AC073544.1-201ENST00000600110 1595 ntBASIC3.12□□□□□ -1.91
DDX43Q9NXZ2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC099654.7-201ENST00000635788 2127 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC008669.1-201ENST00000565823 2178 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 RNY4P16-201ENST00000364768 94 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms