Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Gm27867-201ENSMUST00000184778 125 ntBASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Uspl1Q3ULM6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Uspl1Q3ULM6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Uspl1Q3ULM6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Uspl1Q3ULM6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Uspl1Q3ULM6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Uspl1Q3ULM6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Uspl1Q3ULM6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Gm15165-201ENSMUST00000118140 502 ntBASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Uspl1Q3ULM6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.88■□□□□ 0.93
Uspl1Q3ULM6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Uspl1Q3ULM6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Uspl1Q3ULM6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.85■□□□□ 0.93
Uspl1Q3ULM6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms