Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 ZNF876P-202ENST00000398732 1485 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 RNU5D-1-201ENST00000363299 116 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 MIR1305-201ENST00000408300 86 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN4AP35499 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN4AP35499 UBBP3-201ENST00000445497 241 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN4AP35499 snoU13.8-201ENST00000458890 104 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 AC005410.1-202ENST00000460347 485 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 MTND2P14-201ENST00000482139 351 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 NCOR1P1-202ENST00000486162 291 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN4AP35499 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN4AP35499 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN4AP35499 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN4AP35499 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN4AP35499 BNIP3P40-201ENST00000596017 556 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 AC034229.4-201ENST00000607861 441 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 AC040168.1-201ENST00000623594 991 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN4AP35499 OR5H6-203ENST00000642105 978 ntBASIC1.97□□□□□ -2.09
SCN4AP35499 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SCN4AP35499 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SCN4AP35499 Y_RNA.354-201ENST00000365448 111 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN4AP35499 MIR493-201ENST00000385254 89 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 SSR1P2-201ENST00000415208 787 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 Z80107.1-201ENST00000436830 412 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 UBE2V1P13-201ENST00000436983 439 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 SNRPEP7-201ENST00000438350 220 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SCN4AP35499 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN4AP35499 PCMTD1P2-201ENST00000565017 355 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 MIR4419B-201ENST00000577260 68 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 MIR4999-201ENST00000585029 91 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AL391001.1-201ENST00000602747 715 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AC012150.2-201ENST00000621300 544 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AC110079.1-202ENST00000635213 138 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN4AP35499 DDX10P1-201ENST00000448545 1933 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC011477.1-204ENST00000623416 1325 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AL391994.1-201ENST00000254724 282 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 MIR135A2-201ENST00000384854 100 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 DHFRP6-201ENST00000401776 268 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 ERHP2-201ENST00000402323 299 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC084290.1-201ENST00000434995 374 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 RPL26P6-201ENST00000440913 438 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 MTND3P1-201ENST00000441336 220 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AC009474.2-201ENST00000451383 136 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 ANKRD26P4-201ENST00000455755 950 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC034244.1-201ENST00000507687 207 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 HMGB1P28-201ENST00000507778 552 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 RPPH1-2P-201ENST00000516688 293 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.96□□□□□ -2.1
SCN4AP35499 OR4R1P-201ENST00000529879 463 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN4AP35499 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.96□□□□□ -2.1
SCN4AP35499 AC105129.3-201ENST00000605455 485 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AC245297.2-201ENST00000610119 565 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 AL133445.2-201ENST00000611191 527 ntBASIC1.96□□□□□ -2.1
SCN4AP35499 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
SCN4AP35499 AC092447.10-201ENST00000620607 1652 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 Z82195.2-201ENST00000612348 18351 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 AC005832.2-201ENST00000538921 1430 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-1-201ENST00000383898 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-217P-201ENST00000384164 104 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-42P-201ENST00000384165 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-36P-201ENST00000384172 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-4P-201ENST00000384205 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-5P-201ENST00000384238 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-3P-201ENST00000384314 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-2-201ENST00000384627 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-9-201ENST00000384776 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-33P-201ENST00000384793 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 U3.40-201ENST00000408706 208 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RPL21P24-201ENST00000413752 448 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 CCDC58P2-201ENST00000417131 366 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN4AP35499 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN4AP35499 ELOCP30-201ENST00000447108 299 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN4AP35499 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.95□□□□□ -2.1
SCN4AP35499 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN4AP35499 AL031183.1-201ENST00000457667 207 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms