Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 RPL36AP6-201ENST00000435770 321 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 AC004866.2-201ENST00000438285 481 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 HMGB1P18-201ENST00000438801 619 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.98□□□□□ -1.77
PNKPQ96T60 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.98□□□□□ -1.77
PNKPQ96T60 AC091885.1-201ENST00000506658 268 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 FAM206BP-201ENST00000510179 541 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 AC108078.2-201ENST00000510750 236 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.98□□□□□ -1.77
PNKPQ96T60 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.98□□□□□ -1.77
PNKPQ96T60 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.98□□□□□ -1.77
PNKPQ96T60 KLKP1-201ENST00000595979 403 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 AC244505.7-201ENST00000599675 272 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 AL390240.1-201ENST00000612950 384 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 uc_338.34-201ENST00000617467 174 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.98□□□□□ -1.77
PNKPQ96T60 AL589994.2-201ENST00000621124 579 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.98□□□□□ -1.77
PNKPQ96T60 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.98□□□□□ -1.77
PNKPQ96T60 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.98□□□□□ -1.77
PNKPQ96T60 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.98□□□□□ -1.77
PNKPQ96T60 AL034408.1-202ENST00000636088 415 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PNKPQ96T60 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PNKPQ96T60 MTND4P14-201ENST00000435799 1354 ntBASIC3.98□□□□□ -1.77
PNKPQ96T60 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PNKPQ96T60 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PNKPQ96T60 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PNKPQ96T60 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.97□□□□□ -1.77
PNKPQ96T60 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.97□□□□□ -1.77
PNKPQ96T60 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 RNA5SP119-201ENST00000362715 117 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 Y_RNA.378-201ENST00000365652 113 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 RNU6-701P-201ENST00000384059 107 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 SNORA5A-201ENST00000384111 134 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 MIR23A-201ENST00000385245 73 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 snosnR66.1-201ENST00000391095 99 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 AL451054.2-201ENST00000420896 202 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 HSPE1P1-201ENST00000421494 318 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AL139247.1-201ENST00000422768 325 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 RPL7P46-201ENST00000425129 740 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.97□□□□□ -1.77
PNKPQ96T60 AC024082.2-201ENST00000434771 238 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 SNORA71B-202ENST00000439232 272 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 HMGB3P11-201ENST00000440127 604 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 PRPS1P1-201ENST00000445305 876 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 RPL23AP11-201ENST00000475260 469 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.97□□□□□ -1.77
PNKPQ96T60 RN7SL432P-201ENST00000484057 298 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AC083904.1-201ENST00000487828 231 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 CCDC34P1-201ENST00000507441 517 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 RBBP4P6-201ENST00000508098 202 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 HMGN1P11-201ENST00000508668 303 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.97□□□□□ -1.77
PNKPQ96T60 RNU6-390P-201ENST00000516259 103 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AC026403.1-201ENST00000518938 295 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 DEFB109D-201ENST00000529497 240 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.97□□□□□ -1.77
PNKPQ96T60 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.97□□□□□ -1.77
PNKPQ96T60 XIAPP1-201ENST00000603162 600 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 IGHV3-29-201ENST00000604817 344 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 CTHRC1P1-201ENST00000605383 469 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AC064836.2-201ENST00000609491 462 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AC104237.2-201ENST00000612456 443 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AC110801.1-201ENST00000623590 212 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 AL592437.2-201ENST00000421655 2434 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 AL139811.1-201ENST00000424779 2299 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 AL645937.1-201ENST00000641739 1652 ntBASIC3.97□□□□□ -1.77
PNKPQ96T60 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PNKPQ96T60 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
PNKPQ96T60 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PNKPQ96T60 Y_RNA.100-201ENST00000363141 102 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 SNORD46.1-201ENST00000364139 104 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 SNORA23-201ENST00000365128 182 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 AP002088.1-201ENST00000382740 395 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 RNU6-946P-201ENST00000383878 107 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 Y_RNA.474-201ENST00000384341 102 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 RNU6-837P-201ENST00000391056 108 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 RPL21P17-201ENST00000397467 475 ntBASIC3.96□□□□□ -1.78
PNKPQ96T60 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.96□□□□□ -1.78
PNKPQ96T60 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms