Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 EEF1B2P4-201ENST00000551398 348 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.64□□□□□ -1.99
HDAC3O15379 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.64□□□□□ -1.99
HDAC3O15379 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.64□□□□□ -1.99
HDAC3O15379 MIR3611-201ENST00000584484 83 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL353997.4-201ENST00000586196 166 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 UBE2L4-201ENST00000587688 464 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL356575.1-201ENST00000603008 283 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC004987.4-201ENST00000603383 338 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.64□□□□□ -1.99
HDAC3O15379 AC004853.1-201ENST00000604902 698 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC3O15379 AP000254.1-201ENST00000609934 520 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC245517.5-201ENST00000611529 162 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC122108.2-201ENST00000611946 526 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AC010678.1-201ENST00000614118 713 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 AL158801.5-201ENST00000623123 465 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.64□□□□□ -1.99
HDAC3O15379 AC093536.2-201ENST00000565257 1406 ntBASIC2.64□□□□□ -1.99
HDAC3O15379 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC3O15379 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HDAC3O15379 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HDAC3O15379 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
HDAC3O15379 SNORA25.6-201ENST00000364121 118 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 SNORA75-201ENST00000384158 137 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 SNORD51-201ENST00000384320 80 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 RNU6-809P-201ENST00000384461 107 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 RNU6-821P-201ENST00000390995 107 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.63□□□□□ -1.99
HDAC3O15379 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.63□□□□□ -1.99
HDAC3O15379 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 USP9YP14-201ENST00000430663 563 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC112220.1-201ENST00000434628 355 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 RPS24P1-201ENST00000438550 371 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC3O15379 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.63□□□□□ -1.99
HDAC3O15379 AL022238.1-201ENST00000442557 355 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 PAXBP1P1-201ENST00000449315 447 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 RPL23AP31-201ENST00000456160 467 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 TPT1P7-201ENST00000458300 517 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC116337.2-201ENST00000477662 156 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 FAM172BP-201ENST00000487497 1089 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC106872.3-201ENST00000495104 446 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC3O15379 AC026427.2-201ENST00000506228 536 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC022447.3-201ENST00000506865 495 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC3O15379 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.63□□□□□ -1.99
HDAC3O15379 RNA5SP367-201ENST00000516557 118 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 RNU6-714P-201ENST00000516963 103 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.63□□□□□ -1.99
HDAC3O15379 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.63□□□□□ -1.99
HDAC3O15379 AC018630.1-201ENST00000541376 925 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 MIR5697-201ENST00000578045 78 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HDAC3O15379 AC068790.2-201ENST00000602601 557 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC012669.1-201ENST00000603209 283 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 YPEL5P2-201ENST00000605553 359 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC013562.2-201ENST00000611632 603 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AL162274.2-201ENST00000614406 332 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 AC034102.8-201ENST00000615146 484 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.63□□□□□ -1.99
HDAC3O15379 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
HDAC3O15379 MTND4P5-201ENST00000435821 1374 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AL049780.3-201ENST00000624612 1583 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HDAC3O15379 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
HDAC3O15379 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
HDAC3O15379 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
HDAC3O15379 RNU6-853P-201ENST00000364306 107 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 RNU1-100P-201ENST00000365255 165 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 RNY3P10-201ENST00000384764 102 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 MIR491-201ENST00000384877 84 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 MIR1305-201ENST00000408300 86 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 MTCO1P17-201ENST00000411522 491 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.62□□□□□ -1.99
HDAC3O15379 MTCO1P21-201ENST00000416634 589 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.62□□□□□ -1.99
HDAC3O15379 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.62□□□□□ -1.99
HDAC3O15379 MTCO1P42-201ENST00000457379 726 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.62□□□□□ -1.99
HDAC3O15379 AF131216.2-201ENST00000512316 564 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.62□□□□□ -1.99
HDAC3O15379 AC017037.2-201ENST00000513850 890 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC116347.2-201ENST00000514912 523 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 RN7SKP57-201ENST00000517248 293 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC090136.1-201ENST00000520009 240 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 HMGB1P41-201ENST00000520234 440 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.62□□□□□ -1.99
HDAC3O15379 AP002963.1-201ENST00000530590 184 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 SNRPGP16-201ENST00000533275 226 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.62□□□□□ -1.99
HDAC3O15379 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.62□□□□□ -1.99
HDAC3O15379 AC060766.3-201ENST00000591442 263 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC012493.2-201ENST00000595083 291 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC025165.5-201ENST00000602802 578 ntBASIC2.62□□□□□ -1.99
HDAC3O15379 AC078795.2-201ENST00000602835 1252 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms