Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mre11Q61216 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.54■□□□□ 0.72
Mre11Q61216 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.54■□□□□ 0.72
Mre11Q61216 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mre11Q61216 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Mre11Q61216 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Mre11Q61216 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.53■□□□□ 0.72
Mre11Q61216 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Mre11Q61216 Gm4974-201ENSMUST00000209974 875 ntBASIC19.53■□□□□ 0.72
Mre11Q61216 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.53■□□□□ 0.72
Mre11Q61216 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19.53■□□□□ 0.72
Mre11Q61216 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.53■□□□□ 0.72
Mre11Q61216 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mre11Q61216 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Mre11Q61216 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Mre11Q61216 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.52■□□□□ 0.72
Mre11Q61216 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.52■□□□□ 0.72
Mre11Q61216 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.52■□□□□ 0.72
Mre11Q61216 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.52■□□□□ 0.72
Mre11Q61216 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Mre11Q61216 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mre11Q61216 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Mre11Q61216 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Mre11Q61216 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mre11Q61216 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mre11Q61216 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Mre11Q61216 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mre11Q61216 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.52■□□□□ 0.71
Mre11Q61216 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mre11Q61216 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Mre11Q61216 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.51■□□□□ 0.71
Mre11Q61216 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Mre11Q61216 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Gm10849-201ENSMUST00000100397 618 ntBASIC19.51■□□□□ 0.71
Mre11Q61216 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.51■□□□□ 0.71
Mre11Q61216 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Mre11Q61216 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 BC037039-201ENSMUST00000192003 2205 ntBASIC19.51■□□□□ 0.71
Mre11Q61216 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mre11Q61216 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mre11Q61216 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Mre11Q61216 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.5■□□□□ 0.71
Mre11Q61216 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Mre11Q61216 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Mre11Q61216 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Gm6211-202ENSMUST00000167849 925 ntBASIC19.5■□□□□ 0.71
Mre11Q61216 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.5■□□□□ 0.71
Mre11Q61216 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Mre11Q61216 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mre11Q61216 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Mre11Q61216 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms