Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm7791-201ENSMUST00000219066 539 ntBASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim43aQ3TL54 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim43aQ3TL54 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim43aQ3TL54 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim43aQ3TL54 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Asic1-205ENSMUST00000228185 1818 ntBASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Mir5122-201ENSMUST00000175004 89 ntBASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Gm37055-201ENSMUST00000191866 133 ntBASIC17.22■□□□□ 0.35
Trim43aQ3TL54 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.22■□□□□ 0.35
Trim43aQ3TL54 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim43aQ3TL54 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim43aQ3TL54 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms