Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 Z74021.1-201ENST00000423610 407 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AL590632.1-201ENST00000424289 371 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.33□□□□□ -1.72
KLF4O43474 HMGB3P8-201ENST00000449709 577 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.33□□□□□ -1.72
KLF4O43474 RPL12P25-201ENST00000455592 494 ntBASIC4.33□□□□□ -1.72
KLF4O43474 RN7SL738P-201ENST00000470264 297 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AC006463.2-201ENST00000473326 348 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AL135752.1-201ENST00000479477 471 ntBASIC4.33□□□□□ -1.72
KLF4O43474 HMGN1P11-201ENST00000508668 303 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AC109479.2-201ENST00000517842 174 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AC090281.1-201ENST00000523019 276 ntBASIC4.33□□□□□ -1.72
KLF4O43474 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.33□□□□□ -1.72
KLF4O43474 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.33□□□□□ -1.72
KLF4O43474 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
KLF4O43474 RN7SL52P-201ENST00000584271 284 ntBASIC4.33□□□□□ -1.72
KLF4O43474 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 ELOCP5-201ENST00000604924 333 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AC004825.2-201ENST00000616634 455 ntBASIC4.33□□□□□ -1.72
KLF4O43474 MIR6076-201ENST00000617521 113 ntBASIC4.33□□□□□ -1.72
KLF4O43474 RN7SL722P-201ENST00000617780 284 ntBASIC4.33□□□□□ -1.72
KLF4O43474 RN7SL565P-201ENST00000618246 284 ntBASIC4.33□□□□□ -1.72
KLF4O43474 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.33□□□□□ -1.72
KLF4O43474 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
KLF4O43474 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
KLF4O43474 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.33□□□□□ -1.72
KLF4O43474 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KLF4O43474 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KLF4O43474 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
KLF4O43474 MTND5P10-201ENST00000603719 1809 ntBASIC4.32□□□□□ -1.72
KLF4O43474 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.32□□□□□ -1.72
KLF4O43474 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 AC002546.1-201ENST00000588041 2504 ntBASIC4.32□□□□□ -1.72
KLF4O43474 MTND4P27-201ENST00000450813 1354 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 RNA5SP191-201ENST00000362585 102 ntBASIC4.32□□□□□ -1.72
KLF4O43474 RNU6-384P-201ENST00000364900 104 ntBASIC4.32□□□□□ -1.72
KLF4O43474 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
KLF4O43474 RNU6-166P-201ENST00000384371 107 ntBASIC4.32□□□□□ -1.72
KLF4O43474 RNU6-933P-201ENST00000384424 107 ntBASIC4.32□□□□□ -1.72
KLF4O43474 RNU6-1035P-201ENST00000384477 107 ntBASIC4.32□□□□□ -1.72
KLF4O43474 SNORD116-29-201ENST00000384516 83 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AL590762.2-201ENST00000395798 571 ntBASIC4.32□□□□□ -1.72
KLF4O43474 FAR2P2-201ENST00000413041 594 ntBASIC4.32□□□□□ -1.72
KLF4O43474 RPL26P27-201ENST00000414397 437 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.32□□□□□ -1.72
KLF4O43474 RPS15AP10-201ENST00000432472 382 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC007389.2-201ENST00000434630 306 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 AC011753.3-201ENST00000443436 406 ntBASIC4.32□□□□□ -1.72
KLF4O43474 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.32□□□□□ -1.72
KLF4O43474 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.32□□□□□ -1.72
KLF4O43474 MRPS31P2-201ENST00000451581 518 ntBASIC4.32□□□□□ -1.72
KLF4O43474 MTATP6P7-201ENST00000453315 681 ntBASIC4.32□□□□□ -1.72
KLF4O43474 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.32□□□□□ -1.72
KLF4O43474 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.32□□□□□ -1.72
KLF4O43474 RPL30P15-201ENST00000457129 321 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC006026.2-201ENST00000457376 180 ntBASIC4.32□□□□□ -1.72
KLF4O43474 ZFRP1-201ENST00000457579 2970 ntBASIC4.32□□□□□ -1.72
KLF4O43474 RNU6-1037P-201ENST00000459571 107 ntBASIC4.32□□□□□ -1.72
KLF4O43474 RPL9P32-201ENST00000464118 620 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC027575.1-201ENST00000481064 460 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC008897.1-201ENST00000494006 347 ntBASIC4.32□□□□□ -1.72
KLF4O43474 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.32□□□□□ -1.72
KLF4O43474 AC021146.3-201ENST00000511911 260 ntBASIC4.32□□□□□ -1.72
KLF4O43474 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.32□□□□□ -1.72
KLF4O43474 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.32□□□□□ -1.72
KLF4O43474 AC104576.1-201ENST00000524225 88 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.32□□□□□ -1.72
KLF4O43474 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.32□□□□□ -1.72
KLF4O43474 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.32□□□□□ -1.72
KLF4O43474 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.32□□□□□ -1.72
KLF4O43474 SYF2P1-201ENST00000550658 413 ntBASIC4.32□□□□□ -1.72
KLF4O43474 MIR5699-201ENST00000578903 90 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC091042.1-201ENST00000579213 173 ntBASIC4.32□□□□□ -1.72
KLF4O43474 MIR3667-201ENST00000581025 74 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AL391358.1-201ENST00000605342 190 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC124303.1-201ENST00000605703 360 ntBASIC4.32□□□□□ -1.72
KLF4O43474 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 AC091979.2-201ENST00000607514 214 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC002076.2-201ENST00000617362 122 ntBASIC4.32□□□□□ -1.72
KLF4O43474 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.32□□□□□ -1.72
KLF4O43474 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.32□□□□□ -1.72
KLF4O43474 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.32□□□□□ -1.72
KLF4O43474 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLF4O43474 AL672167.1-203ENST00000641299 2975 ntBASIC4.32□□□□□ -1.72
KLF4O43474 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms