Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.79□□□□□ -1.96
HDAC3O15379 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 AC012435.1-202ENST00000568772 240 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HDAC3O15379 MIR3605-201ENST00000583214 100 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 AL596327.1-201ENST00000603629 213 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 AC095031.1-201ENST00000623685 672 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 AC079228.1-201ENST00000624774 1049 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 PCMTD1P7-201ENST00000634506 357 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HDAC3O15379 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.79□□□□□ -1.96
HDAC3O15379 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
HDAC3O15379 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HDAC3O15379 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HDAC3O15379 MTCO1P23-201ENST00000415223 1526 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HDAC3O15379 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HDAC3O15379 Y_RNA.51-201ENST00000362725 102 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 RNA5SP72-201ENST00000364442 117 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
HDAC3O15379 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HDAC3O15379 RNU5A-2P-201ENST00000384337 116 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 RPS4XP3-201ENST00000398541 413 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 RNU6-920P-201ENST00000410926 92 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AL513477.1-202ENST00000417061 214 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 NPM1P11-201ENST00000417106 855 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 MORF4L1P6-201ENST00000418771 268 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.78□□□□□ -1.96
HDAC3O15379 SUMO1P4-201ENST00000429430 302 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 ZYG11AP1-201ENST00000430329 837 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.78□□□□□ -1.96
HDAC3O15379 LARP1BP3-201ENST00000437229 869 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.78□□□□□ -1.96
HDAC3O15379 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.78□□□□□ -1.96
HDAC3O15379 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.78□□□□□ -1.96
HDAC3O15379 USP9YP10-201ENST00000454868 628 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.78□□□□□ -1.96
HDAC3O15379 RNA5SP310-201ENST00000459084 116 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 RPL30P9-201ENST00000465586 330 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 RPS27AP9-201ENST00000477681 438 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HDAC3O15379 AC091435.1-201ENST00000505442 584 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.78□□□□□ -1.96
HDAC3O15379 OR4A45P-201ENST00000529954 901 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HDAC3O15379 HPRT1P3-201ENST00000539521 576 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.78□□□□□ -1.96
HDAC3O15379 AL355836.1-201ENST00000555951 870 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 MTCYBP33-201ENST00000575007 1130 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.78□□□□□ -1.96
HDAC3O15379 GLUD1P4-201ENST00000590914 418 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.78□□□□□ -1.96
HDAC3O15379 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.78□□□□□ -1.96
HDAC3O15379 AC010620.2-201ENST00000600135 313 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AC012468.1-201ENST00000604888 430 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HDAC3O15379 AC090116.1-201ENST00000615679 446 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AC025588.4-201ENST00000615802 908 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
HDAC3O15379 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 AC231657.1-201ENST00000624313 397 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.78□□□□□ -1.96
HDAC3O15379 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.78□□□□□ -1.96
HDAC3O15379 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.78□□□□□ -1.97
HDAC3O15379 ZNF734P-201ENST00000419494 1534 ntBASIC2.78□□□□□ -1.97
HDAC3O15379 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
HDAC3O15379 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.77□□□□□ -1.97
HDAC3O15379 AC011477.1-204ENST00000623416 1325 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HDAC3O15379 Y_RNA.18-201ENST00000362461 102 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HDAC3O15379 RNU6-730P-201ENST00000383954 104 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 MIR34B-201ENST00000385076 84 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL031577.2-201ENST00000404133 280 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL137014.1-201ENST00000420490 1226 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL645937.1-202ENST00000421799 937 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.77□□□□□ -1.97
HDAC3O15379 DUTP6-201ENST00000425573 462 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.77□□□□□ -1.97
HDAC3O15379 AC005326.1-201ENST00000429197 123 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC010153.1-201ENST00000432862 727 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.77□□□□□ -1.97
HDAC3O15379 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.77□□□□□ -1.97
HDAC3O15379 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.77□□□□□ -1.97
HDAC3O15379 MTND1P29-201ENST00000448112 647 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.77□□□□□ -1.97
HDAC3O15379 ZNF114P1-201ENST00000453500 292 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 RPL31P3-201ENST00000458430 332 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 MEMO1P3-201ENST00000459811 302 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC003982.1-202ENST00000469928 248 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 AC072039.1-201ENST00000477611 581 ntBASIC2.77□□□□□ -1.97
HDAC3O15379 HMGB1P36-201ENST00000487709 576 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms