Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC28.83■■■□□ 2.21
Rtl1Q7M732 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtl1Q7M732 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC28.83■■■□□ 2.21
Rtl1Q7M732 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC28.83■■■□□ 2.21
Rtl1Q7M732 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Rtl1Q7M732 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rtl1Q7M732 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Gm11780-201ENSMUST00000136880 516 ntBASIC28.82■■■□□ 2.2
Rtl1Q7M732 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC28.82■■■□□ 2.2
Rtl1Q7M732 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Gm42918-201ENSMUST00000199249 1580 ntBASIC28.82■■■□□ 2.2
Rtl1Q7M732 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rtl1Q7M732 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Gm18206-201ENSMUST00000207027 926 ntBASIC28.81■■■□□ 2.2
Rtl1Q7M732 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtl1Q7M732 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Gm6257-201ENSMUST00000163864 910 ntBASIC28.8■■■□□ 2.2
Rtl1Q7M732 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
Rtl1Q7M732 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtl1Q7M732 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC28.79■■■□□ 2.2
Rtl1Q7M732 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rtl1Q7M732 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Gm5682-201ENSMUST00000173402 505 ntBASIC28.77■■■□□ 2.2
Rtl1Q7M732 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Gm27646-201ENSMUST00000183989 110 ntBASIC28.77■■■□□ 2.2
Rtl1Q7M732 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtl1Q7M732 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC28.76■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms