Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
4933424G06RikA0A140LIP3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
4933424G06RikA0A140LIP3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
4933424G06RikA0A140LIP3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
4933424G06RikA0A140LIP3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
4933424G06RikA0A140LIP3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Rps4l-201ENSMUST00000071745 943 ntBASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
4933424G06RikA0A140LIP3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
4933424G06RikA0A140LIP3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
4933424G06RikA0A140LIP3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms