Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Gm9397-201ENSMUST00000200125 605 ntBASIC17.56■□□□□ 0.4
PdfS4R2K0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PdfS4R2K0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PdfS4R2K0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PdfS4R2K0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PdfS4R2K0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PdfS4R2K0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PdfS4R2K0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PdfS4R2K0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdfS4R2K0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PdfS4R2K0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PdfS4R2K0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PdfS4R2K0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdfS4R2K0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdfS4R2K0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdfS4R2K0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.53■□□□□ 0.4
PdfS4R2K0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PdfS4R2K0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PdfS4R2K0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.52■□□□□ 0.4
PdfS4R2K0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.52■□□□□ 0.4
PdfS4R2K0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.52■□□□□ 0.4
PdfS4R2K0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PdfS4R2K0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdfS4R2K0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PdfS4R2K0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PdfS4R2K0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PdfS4R2K0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PdfS4R2K0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PdfS4R2K0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.51■□□□□ 0.39
PdfS4R2K0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.51■□□□□ 0.39
PdfS4R2K0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdfS4R2K0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.5■□□□□ 0.39
PdfS4R2K0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdfS4R2K0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PdfS4R2K0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdfS4R2K0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PdfS4R2K0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PdfS4R2K0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PdfS4R2K0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdfS4R2K0 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.49■□□□□ 0.39
PdfS4R2K0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PdfS4R2K0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PdfS4R2K0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PdfS4R2K0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PdfS4R2K0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PdfS4R2K0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.48■□□□□ 0.39
PdfS4R2K0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PdfS4R2K0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PdfS4R2K0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PdfS4R2K0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PdfS4R2K0 Gm24970-201ENSMUST00000175582 82 ntBASIC17.47■□□□□ 0.39
PdfS4R2K0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.47■□□□□ 0.39
PdfS4R2K0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PdfS4R2K0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.47■□□□□ 0.39
PdfS4R2K0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PdfS4R2K0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PdfS4R2K0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PdfS4R2K0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.45■□□□□ 0.38
PdfS4R2K0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PdfS4R2K0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PdfS4R2K0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PdfS4R2K0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PdfS4R2K0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PdfS4R2K0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PdfS4R2K0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PdfS4R2K0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PdfS4R2K0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PdfS4R2K0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PdfS4R2K0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PdfS4R2K0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PdfS4R2K0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PdfS4R2K0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PdfS4R2K0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PdfS4R2K0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdfS4R2K0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.43■□□□□ 0.38
PdfS4R2K0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.43■□□□□ 0.38
PdfS4R2K0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdfS4R2K0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdfS4R2K0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PdfS4R2K0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdfS4R2K0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.42■□□□□ 0.38
PdfS4R2K0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdfS4R2K0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdfS4R2K0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdfS4R2K0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdfS4R2K0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PdfS4R2K0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PdfS4R2K0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PdfS4R2K0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.41■□□□□ 0.38
PdfS4R2K0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PdfS4R2K0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms