Protein–RNA interactions for Protein: Q9EPS9

Vmn1r56, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r56Q9EPS9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vmn1r56Q9EPS9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r56Q9EPS9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r56Q9EPS9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Vmn1r56Q9EPS9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r56Q9EPS9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vmn1r56Q9EPS9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vmn1r56Q9EPS9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vmn1r56Q9EPS9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r56Q9EPS9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.65■□□□□ 0.9
Vmn1r56Q9EPS9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r56Q9EPS9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vmn1r56Q9EPS9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vmn1r56Q9EPS9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vmn1r56Q9EPS9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r56Q9EPS9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r56Q9EPS9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Vmn1r56Q9EPS9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r56Q9EPS9 Gm30023-201ENSMUST00000197970 889 ntBASIC20.62■□□□□ 0.89
Vmn1r56Q9EPS9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r56Q9EPS9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vmn1r56Q9EPS9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r56Q9EPS9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r56Q9EPS9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.61■□□□□ 0.89
Vmn1r56Q9EPS9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.61■□□□□ 0.89
Vmn1r56Q9EPS9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vmn1r56Q9EPS9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r56Q9EPS9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.6■□□□□ 0.89
Vmn1r56Q9EPS9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r56Q9EPS9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.6■□□□□ 0.89
Vmn1r56Q9EPS9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r56Q9EPS9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vmn1r56Q9EPS9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.58■□□□□ 0.89
Vmn1r56Q9EPS9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.58■□□□□ 0.89
Vmn1r56Q9EPS9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vmn1r56Q9EPS9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vmn1r56Q9EPS9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Vmn1r56Q9EPS9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r56Q9EPS9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r56Q9EPS9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r56Q9EPS9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r56Q9EPS9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r56Q9EPS9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r56Q9EPS9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r56Q9EPS9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Vmn1r56Q9EPS9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Vmn1r56Q9EPS9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r56Q9EPS9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r56Q9EPS9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Vmn1r56Q9EPS9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r56Q9EPS9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.54■□□□□ 0.88
Vmn1r56Q9EPS9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.53■□□□□ 0.88
Vmn1r56Q9EPS9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.53■□□□□ 0.88
Vmn1r56Q9EPS9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r56Q9EPS9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r56Q9EPS9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.52■□□□□ 0.88
Vmn1r56Q9EPS9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Vmn1r56Q9EPS9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r56Q9EPS9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r56Q9EPS9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r56Q9EPS9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.5■□□□□ 0.87
Vmn1r56Q9EPS9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.5■□□□□ 0.87
Vmn1r56Q9EPS9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r56Q9EPS9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r56Q9EPS9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r56Q9EPS9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r56Q9EPS9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r56Q9EPS9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r56Q9EPS9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r56Q9EPS9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r56Q9EPS9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r56Q9EPS9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Vmn1r56Q9EPS9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vmn1r56Q9EPS9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.48■□□□□ 0.87
Vmn1r56Q9EPS9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Vmn1r56Q9EPS9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r56Q9EPS9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vmn1r56Q9EPS9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms