Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgn3Q9DCB1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hmgn3Q9DCB1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Hmgn3Q9DCB1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.87■■□□□ 1.09
Hmgn3Q9DCB1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.87■■□□□ 1.09
Hmgn3Q9DCB1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hmgn3Q9DCB1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.86■■□□□ 1.09
Hmgn3Q9DCB1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.85■■□□□ 1.09
Hmgn3Q9DCB1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgn3Q9DCB1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hmgn3Q9DCB1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Hmgn3Q9DCB1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hmgn3Q9DCB1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hmgn3Q9DCB1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Hmgn3Q9DCB1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hmgn3Q9DCB1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn3Q9DCB1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hmgn3Q9DCB1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgn3Q9DCB1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hmgn3Q9DCB1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgn3Q9DCB1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Hmgn3Q9DCB1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hmgn3Q9DCB1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Hmgn3Q9DCB1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Hmgn3Q9DCB1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Hmgn3Q9DCB1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Hmgn3Q9DCB1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Hmgn3Q9DCB1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Hmgn3Q9DCB1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Hmgn3Q9DCB1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Hmgn3Q9DCB1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.7■■□□□ 1.06
Hmgn3Q9DCB1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Hmgn3Q9DCB1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Gm24804-201ENSMUST00000174982 85 ntBASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Hmgn3Q9DCB1 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Hmgn3Q9DCB1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgn3Q9DCB1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.66■■□□□ 1.06
Hmgn3Q9DCB1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Hmgn3Q9DCB1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hmgn3Q9DCB1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms