Protein–RNA interactions for Protein: Q9D7I0

Shisa5, Protein shisa-5, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa5Q9D7I0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shisa5Q9D7I0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Shisa5Q9D7I0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Shisa5Q9D7I0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.1■□□□□ 0.97
Shisa5Q9D7I0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
Shisa5Q9D7I0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shisa5Q9D7I0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shisa5Q9D7I0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa5Q9D7I0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa5Q9D7I0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa5Q9D7I0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa5Q9D7I0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa5Q9D7I0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.08■□□□□ 0.97
Shisa5Q9D7I0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Shisa5Q9D7I0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa5Q9D7I0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa5Q9D7I0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa5Q9D7I0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa5Q9D7I0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Shisa5Q9D7I0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa5Q9D7I0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa5Q9D7I0 Particl-201ENSMUST00000205370 1560 ntBASIC21.06■□□□□ 0.96
Shisa5Q9D7I0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa5Q9D7I0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa5Q9D7I0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa5Q9D7I0 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.03■□□□□ 0.96
Shisa5Q9D7I0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa5Q9D7I0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa5Q9D7I0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa5Q9D7I0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa5Q9D7I0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa5Q9D7I0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa5Q9D7I0 Gm37136-201ENSMUST00000194368 194 ntBASIC21.01■□□□□ 0.95
Shisa5Q9D7I0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa5Q9D7I0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa5Q9D7I0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa5Q9D7I0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa5Q9D7I0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa5Q9D7I0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa5Q9D7I0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa5Q9D7I0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa5Q9D7I0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Shisa5Q9D7I0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa5Q9D7I0 Gm7432-201ENSMUST00000210343 879 ntBASIC20.99■□□□□ 0.95
Shisa5Q9D7I0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa5Q9D7I0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa5Q9D7I0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa5Q9D7I0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa5Q9D7I0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.97■□□□□ 0.95
Shisa5Q9D7I0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.96■□□□□ 0.95
Shisa5Q9D7I0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa5Q9D7I0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa5Q9D7I0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa5Q9D7I0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa5Q9D7I0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.94■□□□□ 0.94
Shisa5Q9D7I0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa5Q9D7I0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa5Q9D7I0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.94■□□□□ 0.94
Shisa5Q9D7I0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa5Q9D7I0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Shisa5Q9D7I0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Shisa5Q9D7I0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shisa5Q9D7I0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa5Q9D7I0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa5Q9D7I0 Gm11599-201ENSMUST00000118720 878 ntBASIC20.92■□□□□ 0.94
Shisa5Q9D7I0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.92■□□□□ 0.94
Shisa5Q9D7I0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Shisa5Q9D7I0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa5Q9D7I0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shisa5Q9D7I0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa5Q9D7I0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa5Q9D7I0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Shisa5Q9D7I0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shisa5Q9D7I0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shisa5Q9D7I0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shisa5Q9D7I0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Shisa5Q9D7I0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa5Q9D7I0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shisa5Q9D7I0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa5Q9D7I0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa5Q9D7I0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shisa5Q9D7I0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Shisa5Q9D7I0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shisa5Q9D7I0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Shisa5Q9D7I0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa5Q9D7I0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shisa5Q9D7I0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa5Q9D7I0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.85■□□□□ 0.93
Shisa5Q9D7I0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa5Q9D7I0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shisa5Q9D7I0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Shisa5Q9D7I0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Shisa5Q9D7I0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shisa5Q9D7I0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Shisa5Q9D7I0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Shisa5Q9D7I0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shisa5Q9D7I0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shisa5Q9D7I0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shisa5Q9D7I0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Shisa5Q9D7I0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms