Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lysmd1Q9D0E3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Lysmd1Q9D0E3 Gm45444-201ENSMUST00000211394 898 ntBASIC26.32■■□□□ 1.8
Lysmd1Q9D0E3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.32■■□□□ 1.8
Lysmd1Q9D0E3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lysmd1Q9D0E3 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.31■■□□□ 1.8
Lysmd1Q9D0E3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Lysmd1Q9D0E3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.3■■□□□ 1.8
Lysmd1Q9D0E3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lysmd1Q9D0E3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Lysmd1Q9D0E3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Lysmd1Q9D0E3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Lysmd1Q9D0E3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lysmd1Q9D0E3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lysmd1Q9D0E3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Lysmd1Q9D0E3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lysmd1Q9D0E3 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.26■■□□□ 1.79
Lysmd1Q9D0E3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lysmd1Q9D0E3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Lysmd1Q9D0E3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Lysmd1Q9D0E3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.24■■□□□ 1.79
Lysmd1Q9D0E3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Lysmd1Q9D0E3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lysmd1Q9D0E3 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.22■■□□□ 1.79
Lysmd1Q9D0E3 Gm13238-201ENSMUST00000117655 780 ntBASIC26.22■■□□□ 1.79
Lysmd1Q9D0E3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.22■■□□□ 1.79
Lysmd1Q9D0E3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lysmd1Q9D0E3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Lysmd1Q9D0E3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Lysmd1Q9D0E3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Lysmd1Q9D0E3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Lysmd1Q9D0E3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Lysmd1Q9D0E3 Gm43566-201ENSMUST00000196851 808 ntBASIC26.18■■□□□ 1.78
Lysmd1Q9D0E3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
Lysmd1Q9D0E3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.17■■□□□ 1.78
Lysmd1Q9D0E3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Lysmd1Q9D0E3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Lysmd1Q9D0E3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Lysmd1Q9D0E3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.15■■□□□ 1.78
Lysmd1Q9D0E3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Lysmd1Q9D0E3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.14■■□□□ 1.78
Lysmd1Q9D0E3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Lysmd1Q9D0E3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC26.14■■□□□ 1.78
Lysmd1Q9D0E3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Lysmd1Q9D0E3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
Lysmd1Q9D0E3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Lysmd1Q9D0E3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Lysmd1Q9D0E3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Lysmd1Q9D0E3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
Lysmd1Q9D0E3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Lysmd1Q9D0E3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.12■■□□□ 1.77
Lysmd1Q9D0E3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Lysmd1Q9D0E3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Lysmd1Q9D0E3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.11■■□□□ 1.77
Lysmd1Q9D0E3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Lysmd1Q9D0E3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.1■■□□□ 1.77
Lysmd1Q9D0E3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Lysmd1Q9D0E3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Lysmd1Q9D0E3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Lysmd1Q9D0E3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Lysmd1Q9D0E3 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.09■■□□□ 1.77
Lysmd1Q9D0E3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Lysmd1Q9D0E3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Lysmd1Q9D0E3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Lysmd1Q9D0E3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lysmd1Q9D0E3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Lysmd1Q9D0E3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lysmd1Q9D0E3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Lysmd1Q9D0E3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Lysmd1Q9D0E3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Lysmd1Q9D0E3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Lysmd1Q9D0E3 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.05■■□□□ 1.76
Lysmd1Q9D0E3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC26.05■■□□□ 1.76
Lysmd1Q9D0E3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Lysmd1Q9D0E3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Lysmd1Q9D0E3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Lysmd1Q9D0E3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Lysmd1Q9D0E3 Slc35b2-207ENSMUST00000226086 850 ntBASIC26.03■■□□□ 1.76
Lysmd1Q9D0E3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Lysmd1Q9D0E3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Lysmd1Q9D0E3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Lysmd1Q9D0E3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.02■■□□□ 1.76
Lysmd1Q9D0E3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Lysmd1Q9D0E3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Lysmd1Q9D0E3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Lysmd1Q9D0E3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Lysmd1Q9D0E3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26■■□□□ 1.75
Lysmd1Q9D0E3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26■■□□□ 1.75
Lysmd1Q9D0E3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26■■□□□ 1.75
Lysmd1Q9D0E3 Gm18755-201ENSMUST00000218030 1099 ntBASIC26■■□□□ 1.75
Lysmd1Q9D0E3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Lysmd1Q9D0E3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Lysmd1Q9D0E3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.97■■□□□ 1.75
Lysmd1Q9D0E3 Gm37136-201ENSMUST00000194368 194 ntBASIC25.97■■□□□ 1.75
Lysmd1Q9D0E3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Lysmd1Q9D0E3 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.97■■□□□ 1.75
Lysmd1Q9D0E3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Lysmd1Q9D0E3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
Lysmd1Q9D0E3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.95■■□□□ 1.74
Lysmd1Q9D0E3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms