Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrps28Q9CY16 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.91■□□□□ 0.94
Mrps28Q9CY16 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Mrps28Q9CY16 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mrps28Q9CY16 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrps28Q9CY16 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Mrps28Q9CY16 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mrps28Q9CY16 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mrps28Q9CY16 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.89■□□□□ 0.94
Mrps28Q9CY16 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Mrps28Q9CY16 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.89■□□□□ 0.93
Mrps28Q9CY16 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
Mrps28Q9CY16 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Mrps28Q9CY16 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.89■□□□□ 0.93
Mrps28Q9CY16 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Mrps28Q9CY16 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Mrps28Q9CY16 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mrps28Q9CY16 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mrps28Q9CY16 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mrps28Q9CY16 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.87■□□□□ 0.93
Mrps28Q9CY16 Gm7432-201ENSMUST00000210343 879 ntBASIC20.87■□□□□ 0.93
Mrps28Q9CY16 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrps28Q9CY16 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mrps28Q9CY16 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Mrps28Q9CY16 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mrps28Q9CY16 Gm37136-201ENSMUST00000194368 194 ntBASIC20.85■□□□□ 0.93
Mrps28Q9CY16 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.85■□□□□ 0.93
Mrps28Q9CY16 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.85■□□□□ 0.93
Mrps28Q9CY16 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mrps28Q9CY16 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mrps28Q9CY16 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mrps28Q9CY16 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mrps28Q9CY16 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mrps28Q9CY16 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Mrps28Q9CY16 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mrps28Q9CY16 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Mrps28Q9CY16 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mrps28Q9CY16 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.81■□□□□ 0.92
Mrps28Q9CY16 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Mrps28Q9CY16 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mrps28Q9CY16 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Mrps28Q9CY16 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Mrps28Q9CY16 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Mrps28Q9CY16 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mrps28Q9CY16 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Mrps28Q9CY16 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Mrps28Q9CY16 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mrps28Q9CY16 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Mrps28Q9CY16 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Mrps28Q9CY16 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mrps28Q9CY16 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Mrps28Q9CY16 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.77■□□□□ 0.92
Mrps28Q9CY16 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.77■□□□□ 0.92
Mrps28Q9CY16 Gm11599-201ENSMUST00000118720 878 ntBASIC20.77■□□□□ 0.92
Mrps28Q9CY16 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Mrps28Q9CY16 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Mrps28Q9CY16 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Mrps28Q9CY16 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Mrps28Q9CY16 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Mrps28Q9CY16 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Mrps28Q9CY16 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Mrps28Q9CY16 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mrps28Q9CY16 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Mrps28Q9CY16 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrps28Q9CY16 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrps28Q9CY16 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrps28Q9CY16 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Mrps28Q9CY16 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mrps28Q9CY16 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Mrps28Q9CY16 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.73■□□□□ 0.91
Mrps28Q9CY16 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Mrps28Q9CY16 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Mrps28Q9CY16 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mrps28Q9CY16 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrps28Q9CY16 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mrps28Q9CY16 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mrps28Q9CY16 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.71■□□□□ 0.91
Mrps28Q9CY16 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mrps28Q9CY16 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mrps28Q9CY16 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mrps28Q9CY16 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mrps28Q9CY16 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mrps28Q9CY16 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mrps28Q9CY16 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mrps28Q9CY16 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mrps28Q9CY16 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrps28Q9CY16 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrps28Q9CY16 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Mrps28Q9CY16 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Mrps28Q9CY16 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Mrps28Q9CY16 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Mrps28Q9CY16 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mrps28Q9CY16 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrps28Q9CY16 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mrps28Q9CY16 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrps28Q9CY16 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mrps28Q9CY16 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrps28Q9CY16 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrps28Q9CY16 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mrps28Q9CY16 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms