Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
Pcdh15Q99PJ1 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.71■■■□□ 2.03
Pcdh15Q99PJ1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
Pcdh15Q99PJ1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.71■■■□□ 2.03
Pcdh15Q99PJ1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
Pcdh15Q99PJ1 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.69■■■□□ 2.02
Pcdh15Q99PJ1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pcdh15Q99PJ1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pcdh15Q99PJ1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdh15Q99PJ1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdh15Q99PJ1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
Pcdh15Q99PJ1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdh15Q99PJ1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
Pcdh15Q99PJ1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdh15Q99PJ1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdh15Q99PJ1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdh15Q99PJ1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdh15Q99PJ1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pcdh15Q99PJ1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.64■■■□□ 2.01
Pcdh15Q99PJ1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Pcdh15Q99PJ1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.63■■■□□ 2.01
Pcdh15Q99PJ1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdh15Q99PJ1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.63■■■□□ 2.01
Pcdh15Q99PJ1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdh15Q99PJ1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Pcdh15Q99PJ1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.62■■■□□ 2.01
Pcdh15Q99PJ1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.62■■■□□ 2.01
Pcdh15Q99PJ1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdh15Q99PJ1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.61■■■□□ 2.01
Pcdh15Q99PJ1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.61■■■□□ 2.01
Pcdh15Q99PJ1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.6■■■□□ 2.01
Pcdh15Q99PJ1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdh15Q99PJ1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdh15Q99PJ1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Pcdh15Q99PJ1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcdh15Q99PJ1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.58■■■□□ 2.01
Pcdh15Q99PJ1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Pcdh15Q99PJ1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Pcdh15Q99PJ1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.56■■■□□ 2
Pcdh15Q99PJ1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Pcdh15Q99PJ1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pcdh15Q99PJ1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pcdh15Q99PJ1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Pcdh15Q99PJ1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdh15Q99PJ1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdh15Q99PJ1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdh15Q99PJ1 Gm9812-201ENSMUST00000061934 968 ntBASIC27.53■■■□□ 2
Pcdh15Q99PJ1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC27.53■■■□□ 2
Pcdh15Q99PJ1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27.52■■■□□ 2
Pcdh15Q99PJ1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
Pcdh15Q99PJ1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pcdh15Q99PJ1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.5■■□□□ 1.99
Pcdh15Q99PJ1 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.49■■□□□ 1.99
Pcdh15Q99PJ1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdh15Q99PJ1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdh15Q99PJ1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
Pcdh15Q99PJ1 Gm15546-201ENSMUST00000122095 826 ntBASIC27.47■■□□□ 1.99
Pcdh15Q99PJ1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC27.47■■□□□ 1.99
Pcdh15Q99PJ1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdh15Q99PJ1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdh15Q99PJ1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Pcdh15Q99PJ1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Pcdh15Q99PJ1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Pcdh15Q99PJ1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.45■■□□□ 1.99
Pcdh15Q99PJ1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Pcdh15Q99PJ1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Pcdh15Q99PJ1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdh15Q99PJ1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.43■■□□□ 1.98
Pcdh15Q99PJ1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdh15Q99PJ1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.43■■□□□ 1.98
Pcdh15Q99PJ1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdh15Q99PJ1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdh15Q99PJ1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdh15Q99PJ1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pcdh15Q99PJ1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC27.41■■□□□ 1.98
Pcdh15Q99PJ1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC27.41■■□□□ 1.98
Pcdh15Q99PJ1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Pcdh15Q99PJ1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdh15Q99PJ1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdh15Q99PJ1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdh15Q99PJ1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
Pcdh15Q99PJ1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Pcdh15Q99PJ1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Pcdh15Q99PJ1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdh15Q99PJ1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.38■■□□□ 1.97
Pcdh15Q99PJ1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdh15Q99PJ1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdh15Q99PJ1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdh15Q99PJ1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdh15Q99PJ1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdh15Q99PJ1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdh15Q99PJ1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Pcdh15Q99PJ1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.34■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms