Protein–RNA interactions for Protein: Q99K10

Nlgn1, Neuroligin-1, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlgn1Q99K10 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
Nlgn1Q99K10 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
Nlgn1Q99K10 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.44■■■□□ 2.62
Nlgn1Q99K10 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.43■■■□□ 2.62
Nlgn1Q99K10 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
Nlgn1Q99K10 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Nlgn1Q99K10 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Nlgn1Q99K10 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Nlgn1Q99K10 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Nlgn1Q99K10 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC31.41■■■□□ 2.62
Nlgn1Q99K10 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Nlgn1Q99K10 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Nlgn1Q99K10 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Nlgn1Q99K10 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Nlgn1Q99K10 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Nlgn1Q99K10 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Nlgn1Q99K10 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Nlgn1Q99K10 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Nlgn1Q99K10 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Nlgn1Q99K10 Gm7332-201ENSMUST00000118351 454 ntBASIC31.37■■■□□ 2.61
Nlgn1Q99K10 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Nlgn1Q99K10 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Nlgn1Q99K10 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Nlgn1Q99K10 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Nlgn1Q99K10 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
Nlgn1Q99K10 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC31.35■■■□□ 2.61
Nlgn1Q99K10 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Nlgn1Q99K10 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Nlgn1Q99K10 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.35■■■□□ 2.61
Nlgn1Q99K10 Gm9812-201ENSMUST00000061934 968 ntBASIC31.34■■■□□ 2.61
Nlgn1Q99K10 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Nlgn1Q99K10 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Nlgn1Q99K10 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Nlgn1Q99K10 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Nlgn1Q99K10 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31.33■■■□□ 2.61
Nlgn1Q99K10 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Nlgn1Q99K10 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC31.33■■■□□ 2.61
Nlgn1Q99K10 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Nlgn1Q99K10 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.31■■■□□ 2.6
Nlgn1Q99K10 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.31■■■□□ 2.6
Nlgn1Q99K10 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.3■■■□□ 2.6
Nlgn1Q99K10 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Nlgn1Q99K10 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.29■■■□□ 2.6
Nlgn1Q99K10 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Nlgn1Q99K10 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Nlgn1Q99K10 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Nlgn1Q99K10 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Nlgn1Q99K10 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Nlgn1Q99K10 Gm14523-201ENSMUST00000117260 558 ntBASIC31.28■■■□□ 2.6
Nlgn1Q99K10 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.28■■■□□ 2.6
Nlgn1Q99K10 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Nlgn1Q99K10 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Nlgn1Q99K10 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.27■■■□□ 2.6
Nlgn1Q99K10 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Nlgn1Q99K10 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Nlgn1Q99K10 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Nlgn1Q99K10 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Nlgn1Q99K10 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Nlgn1Q99K10 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Nlgn1Q99K10 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC31.26■■■□□ 2.59
Nlgn1Q99K10 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Nlgn1Q99K10 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Nlgn1Q99K10 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.25■■■□□ 2.59
Nlgn1Q99K10 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC31.25■■■□□ 2.59
Nlgn1Q99K10 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Nlgn1Q99K10 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Nlgn1Q99K10 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Nlgn1Q99K10 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Nlgn1Q99K10 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Nlgn1Q99K10 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Nlgn1Q99K10 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.19■■■□□ 2.58
Nlgn1Q99K10 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Nlgn1Q99K10 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Nlgn1Q99K10 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Nlgn1Q99K10 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Nlgn1Q99K10 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Nlgn1Q99K10 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Nlgn1Q99K10 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Nlgn1Q99K10 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Nlgn1Q99K10 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Nlgn1Q99K10 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.15■■■□□ 2.58
Nlgn1Q99K10 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.15■■■□□ 2.58
Nlgn1Q99K10 Gm14121-201ENSMUST00000121441 1380 ntBASIC31.15■■■□□ 2.58
Nlgn1Q99K10 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
Nlgn1Q99K10 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC31.14■■■□□ 2.58
Nlgn1Q99K10 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC31.13■■■□□ 2.57
Nlgn1Q99K10 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
Nlgn1Q99K10 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Nlgn1Q99K10 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Nlgn1Q99K10 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Nlgn1Q99K10 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Nlgn1Q99K10 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC31.1■■■□□ 2.57
Nlgn1Q99K10 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Nlgn1Q99K10 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.1■■■□□ 2.57
Nlgn1Q99K10 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Nlgn1Q99K10 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC31.08■■■□□ 2.57
Nlgn1Q99K10 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Nlgn1Q99K10 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Nlgn1Q99K10 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Nlgn1Q99K10 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms