Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cdt1Q8R4E9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cdt1Q8R4E9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.42■■□□□ 1.18
Cdt1Q8R4E9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cdt1Q8R4E9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cdt1Q8R4E9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.42■■□□□ 1.18
Cdt1Q8R4E9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
Cdt1Q8R4E9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cdt1Q8R4E9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cdt1Q8R4E9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cdt1Q8R4E9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cdt1Q8R4E9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cdt1Q8R4E9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cdt1Q8R4E9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cdt1Q8R4E9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cdt1Q8R4E9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cdt1Q8R4E9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Cdt1Q8R4E9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cdt1Q8R4E9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cdt1Q8R4E9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Cdt1Q8R4E9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cdt1Q8R4E9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cdt1Q8R4E9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.38■■□□□ 1.17
Cdt1Q8R4E9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cdt1Q8R4E9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cdt1Q8R4E9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.37■■□□□ 1.17
Cdt1Q8R4E9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cdt1Q8R4E9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cdt1Q8R4E9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Cdt1Q8R4E9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cdt1Q8R4E9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cdt1Q8R4E9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cdt1Q8R4E9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Cdt1Q8R4E9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cdt1Q8R4E9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cdt1Q8R4E9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.34■■□□□ 1.17
Cdt1Q8R4E9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.34■■□□□ 1.17
Cdt1Q8R4E9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdt1Q8R4E9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdt1Q8R4E9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cdt1Q8R4E9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.33■■□□□ 1.17
Cdt1Q8R4E9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
Cdt1Q8R4E9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.32■■□□□ 1.16
Cdt1Q8R4E9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cdt1Q8R4E9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.32■■□□□ 1.16
Cdt1Q8R4E9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cdt1Q8R4E9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cdt1Q8R4E9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cdt1Q8R4E9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdt1Q8R4E9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cdt1Q8R4E9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdt1Q8R4E9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Cdt1Q8R4E9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdt1Q8R4E9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.3■■□□□ 1.16
Cdt1Q8R4E9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdt1Q8R4E9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdt1Q8R4E9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cdt1Q8R4E9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdt1Q8R4E9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.29■■□□□ 1.16
Cdt1Q8R4E9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdt1Q8R4E9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cdt1Q8R4E9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdt1Q8R4E9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdt1Q8R4E9 Particl-201ENSMUST00000205370 1560 ntBASIC22.27■■□□□ 1.16
Cdt1Q8R4E9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cdt1Q8R4E9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdt1Q8R4E9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.26■■□□□ 1.15
Cdt1Q8R4E9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdt1Q8R4E9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdt1Q8R4E9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdt1Q8R4E9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdt1Q8R4E9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.24■■□□□ 1.15
Cdt1Q8R4E9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdt1Q8R4E9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdt1Q8R4E9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.23■■□□□ 1.15
Cdt1Q8R4E9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Cdt1Q8R4E9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Cdt1Q8R4E9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cdt1Q8R4E9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdt1Q8R4E9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Cdt1Q8R4E9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.21■■□□□ 1.15
Cdt1Q8R4E9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cdt1Q8R4E9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdt1Q8R4E9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdt1Q8R4E9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdt1Q8R4E9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cdt1Q8R4E9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdt1Q8R4E9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cdt1Q8R4E9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Cdt1Q8R4E9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.18■■□□□ 1.14
Cdt1Q8R4E9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdt1Q8R4E9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdt1Q8R4E9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdt1Q8R4E9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Cdt1Q8R4E9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cdt1Q8R4E9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cdt1Q8R4E9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cdt1Q8R4E9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cdt1Q8R4E9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cdt1Q8R4E9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms