Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r28Q8R2C9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Vmn1r28Q8R2C9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r28Q8R2C9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r28Q8R2C9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.33■■□□□ 1.01
Vmn1r28Q8R2C9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r28Q8R2C9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r28Q8R2C9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r28Q8R2C9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r28Q8R2C9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r28Q8R2C9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r28Q8R2C9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.32■■□□□ 1
Vmn1r28Q8R2C9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r28Q8R2C9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vmn1r28Q8R2C9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r28Q8R2C9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r28Q8R2C9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r28Q8R2C9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r28Q8R2C9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r28Q8R2C9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vmn1r28Q8R2C9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r28Q8R2C9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r28Q8R2C9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r28Q8R2C9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.25■□□□□ 0.99
Vmn1r28Q8R2C9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r28Q8R2C9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r28Q8R2C9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r28Q8R2C9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.24■□□□□ 0.99
Vmn1r28Q8R2C9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Vmn1r28Q8R2C9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r28Q8R2C9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r28Q8R2C9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r28Q8R2C9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.23■□□□□ 0.99
Vmn1r28Q8R2C9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r28Q8R2C9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r28Q8R2C9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.22■□□□□ 0.99
Vmn1r28Q8R2C9 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.22■□□□□ 0.99
Vmn1r28Q8R2C9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Vmn1r28Q8R2C9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vmn1r28Q8R2C9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vmn1r28Q8R2C9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Vmn1r28Q8R2C9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Vmn1r28Q8R2C9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Vmn1r28Q8R2C9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vmn1r28Q8R2C9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.19■□□□□ 0.98
Vmn1r28Q8R2C9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.19■□□□□ 0.98
Vmn1r28Q8R2C9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.19■□□□□ 0.98
Vmn1r28Q8R2C9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.19■□□□□ 0.98
Vmn1r28Q8R2C9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r28Q8R2C9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.18■□□□□ 0.98
Vmn1r28Q8R2C9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Vmn1r28Q8R2C9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Gm6311-201ENSMUST00000073790 878 ntBASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r28Q8R2C9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vmn1r28Q8R2C9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vmn1r28Q8R2C9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.16■□□□□ 0.98
Vmn1r28Q8R2C9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Vmn1r28Q8R2C9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vmn1r28Q8R2C9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.16■□□□□ 0.98
Vmn1r28Q8R2C9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vmn1r28Q8R2C9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Vmn1r28Q8R2C9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vmn1r28Q8R2C9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Vmn1r28Q8R2C9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.14■□□□□ 0.98
Vmn1r28Q8R2C9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vmn1r28Q8R2C9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vmn1r28Q8R2C9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vmn1r28Q8R2C9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vmn1r28Q8R2C9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.13■□□□□ 0.97
Vmn1r28Q8R2C9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vmn1r28Q8R2C9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vmn1r28Q8R2C9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r28Q8R2C9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r28Q8R2C9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r28Q8R2C9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.11■□□□□ 0.97
Vmn1r28Q8R2C9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vmn1r28Q8R2C9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vmn1r28Q8R2C9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r28Q8R2C9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r28Q8R2C9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r28Q8R2C9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.1■□□□□ 0.97
Vmn1r28Q8R2C9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.1■□□□□ 0.97
Vmn1r28Q8R2C9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r28Q8R2C9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vmn1r28Q8R2C9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vmn1r28Q8R2C9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vmn1r28Q8R2C9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.09■□□□□ 0.97
Vmn1r28Q8R2C9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
Vmn1r28Q8R2C9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.08■□□□□ 0.97
Vmn1r28Q8R2C9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Vmn1r28Q8R2C9 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.08■□□□□ 0.97
Vmn1r28Q8R2C9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vmn1r28Q8R2C9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms