Protein–RNA interactions for Protein: Q8K442

Abca8a, ATP-binding cassette sub-family A member 8-A, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8aQ8K442 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
Abca8aQ8K442 Gm12818-201ENSMUST00000117562 1349 ntBASIC33.55■■■□□ 2.96
Abca8aQ8K442 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
Abca8aQ8K442 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Abca8aQ8K442 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
Abca8aQ8K442 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Abca8aQ8K442 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC33.51■■■□□ 2.96
Abca8aQ8K442 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Abca8aQ8K442 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Abca8aQ8K442 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC33.49■■■□□ 2.95
Abca8aQ8K442 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Abca8aQ8K442 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Abca8aQ8K442 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC33.47■■■□□ 2.95
Abca8aQ8K442 Gm14121-201ENSMUST00000121441 1380 ntBASIC33.47■■■□□ 2.95
Abca8aQ8K442 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC33.46■■■□□ 2.95
Abca8aQ8K442 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC33.46■■■□□ 2.95
Abca8aQ8K442 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC33.45■■■□□ 2.95
Abca8aQ8K442 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC33.45■■■□□ 2.94
Abca8aQ8K442 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Abca8aQ8K442 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC33.43■■■□□ 2.94
Abca8aQ8K442 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Abca8aQ8K442 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Abca8aQ8K442 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC33.42■■■□□ 2.94
Abca8aQ8K442 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Abca8aQ8K442 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Abca8aQ8K442 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Abca8aQ8K442 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC33.4■■■□□ 2.94
Abca8aQ8K442 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC33.4■■■□□ 2.94
Abca8aQ8K442 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
Abca8aQ8K442 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Abca8aQ8K442 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.39■■■□□ 2.94
Abca8aQ8K442 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Abca8aQ8K442 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Abca8aQ8K442 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Abca8aQ8K442 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Abca8aQ8K442 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
Abca8aQ8K442 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
Abca8aQ8K442 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Abca8aQ8K442 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
Abca8aQ8K442 Gm9812-201ENSMUST00000061934 968 ntBASIC33.35■■■□□ 2.93
Abca8aQ8K442 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Abca8aQ8K442 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC33.35■■■□□ 2.93
Abca8aQ8K442 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Abca8aQ8K442 Gm9910-201ENSMUST00000195385 1550 ntBASIC33.34■■■□□ 2.93
Abca8aQ8K442 Gm7332-201ENSMUST00000118351 454 ntBASIC33.34■■■□□ 2.93
Abca8aQ8K442 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Abca8aQ8K442 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC33.33■■■□□ 2.93
Abca8aQ8K442 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Abca8aQ8K442 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Abca8aQ8K442 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC33.33■■■□□ 2.93
Abca8aQ8K442 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Abca8aQ8K442 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Abca8aQ8K442 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.92
Abca8aQ8K442 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8aQ8K442 Gm14523-201ENSMUST00000117260 558 ntBASIC33.31■■■□□ 2.92
Abca8aQ8K442 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8aQ8K442 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8aQ8K442 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8aQ8K442 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
Abca8aQ8K442 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Abca8aQ8K442 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Abca8aQ8K442 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Abca8aQ8K442 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
Abca8aQ8K442 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8aQ8K442 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8aQ8K442 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8aQ8K442 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8aQ8K442 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8aQ8K442 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Abca8aQ8K442 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Abca8aQ8K442 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Abca8aQ8K442 Gm6206-201ENSMUST00000133472 2199 ntBASIC33.25■■■□□ 2.91
Abca8aQ8K442 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Abca8aQ8K442 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC33.25■■■□□ 2.91
Abca8aQ8K442 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC33.24■■■□□ 2.91
Abca8aQ8K442 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
Abca8aQ8K442 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Abca8aQ8K442 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Abca8aQ8K442 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Abca8aQ8K442 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
Abca8aQ8K442 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Abca8aQ8K442 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC33.21■■■□□ 2.91
Abca8aQ8K442 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Abca8aQ8K442 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Abca8aQ8K442 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC33.2■■■□□ 2.9
Abca8aQ8K442 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
Abca8aQ8K442 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Abca8aQ8K442 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC33.18■■■□□ 2.9
Abca8aQ8K442 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Abca8aQ8K442 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Abca8aQ8K442 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Abca8aQ8K442 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Abca8aQ8K442 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC33.16■■■□□ 2.9
Abca8aQ8K442 AC153911.1-201ENSMUST00000220378 758 ntBASIC33.16■■■□□ 2.9
Abca8aQ8K442 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC33.15■■■□□ 2.9
Abca8aQ8K442 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Abca8aQ8K442 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Abca8aQ8K442 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Abca8aQ8K442 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Abca8aQ8K442 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms