Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Trnt1Q8K1J6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Trnt1Q8K1J6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnt1Q8K1J6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trnt1Q8K1J6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnt1Q8K1J6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.51■■□□□ 1.19
Trnt1Q8K1J6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
Trnt1Q8K1J6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trnt1Q8K1J6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trnt1Q8K1J6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trnt1Q8K1J6 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.5■■□□□ 1.19
Trnt1Q8K1J6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trnt1Q8K1J6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnt1Q8K1J6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnt1Q8K1J6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnt1Q8K1J6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trnt1Q8K1J6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trnt1Q8K1J6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trnt1Q8K1J6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trnt1Q8K1J6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trnt1Q8K1J6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Trnt1Q8K1J6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trnt1Q8K1J6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trnt1Q8K1J6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.46■■□□□ 1.19
Trnt1Q8K1J6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
Trnt1Q8K1J6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnt1Q8K1J6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnt1Q8K1J6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trnt1Q8K1J6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trnt1Q8K1J6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trnt1Q8K1J6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trnt1Q8K1J6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trnt1Q8K1J6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnt1Q8K1J6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnt1Q8K1J6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnt1Q8K1J6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Trnt1Q8K1J6 Gm37136-201ENSMUST00000194368 194 ntBASIC22.43■■□□□ 1.18
Trnt1Q8K1J6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.43■■□□□ 1.18
Trnt1Q8K1J6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trnt1Q8K1J6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
Trnt1Q8K1J6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnt1Q8K1J6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnt1Q8K1J6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trnt1Q8K1J6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnt1Q8K1J6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trnt1Q8K1J6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trnt1Q8K1J6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trnt1Q8K1J6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trnt1Q8K1J6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Trnt1Q8K1J6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trnt1Q8K1J6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Trnt1Q8K1J6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Trnt1Q8K1J6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnt1Q8K1J6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnt1Q8K1J6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trnt1Q8K1J6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trnt1Q8K1J6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnt1Q8K1J6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnt1Q8K1J6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnt1Q8K1J6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trnt1Q8K1J6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trnt1Q8K1J6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trnt1Q8K1J6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trnt1Q8K1J6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.36■■□□□ 1.17
Trnt1Q8K1J6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trnt1Q8K1J6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trnt1Q8K1J6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trnt1Q8K1J6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trnt1Q8K1J6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trnt1Q8K1J6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Trnt1Q8K1J6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trnt1Q8K1J6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trnt1Q8K1J6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.33■■□□□ 1.17
Trnt1Q8K1J6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Trnt1Q8K1J6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
Trnt1Q8K1J6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trnt1Q8K1J6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.32■■□□□ 1.16
Trnt1Q8K1J6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Trnt1Q8K1J6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.31■■□□□ 1.16
Trnt1Q8K1J6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.31■■□□□ 1.16
Trnt1Q8K1J6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trnt1Q8K1J6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trnt1Q8K1J6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trnt1Q8K1J6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trnt1Q8K1J6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trnt1Q8K1J6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trnt1Q8K1J6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trnt1Q8K1J6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trnt1Q8K1J6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.29■■□□□ 1.16
Trnt1Q8K1J6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trnt1Q8K1J6 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.29■■□□□ 1.16
Trnt1Q8K1J6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trnt1Q8K1J6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trnt1Q8K1J6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trnt1Q8K1J6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trnt1Q8K1J6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trnt1Q8K1J6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trnt1Q8K1J6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trnt1Q8K1J6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trnt1Q8K1J6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms