Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtn4rl1Q8K0S5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtn4rl1Q8K0S5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtn4rl1Q8K0S5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.2■■□□□ 1.46
Rtn4rl1Q8K0S5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.2■■□□□ 1.46
Rtn4rl1Q8K0S5 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn4rl1Q8K0S5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Rtn4rl1Q8K0S5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Rtn4rl1Q8K0S5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn4rl1Q8K0S5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtn4rl1Q8K0S5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rtn4rl1Q8K0S5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtn4rl1Q8K0S5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn4rl1Q8K0S5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.17■■□□□ 1.46
Rtn4rl1Q8K0S5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn4rl1Q8K0S5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn4rl1Q8K0S5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
Rtn4rl1Q8K0S5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtn4rl1Q8K0S5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtn4rl1Q8K0S5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtn4rl1Q8K0S5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Rtn4rl1Q8K0S5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rtn4rl1Q8K0S5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.13■■□□□ 1.45
Rtn4rl1Q8K0S5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn4rl1Q8K0S5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn4rl1Q8K0S5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.12■■□□□ 1.45
Rtn4rl1Q8K0S5 Gm9812-201ENSMUST00000061934 968 ntBASIC24.12■■□□□ 1.45
Rtn4rl1Q8K0S5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn4rl1Q8K0S5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.12■■□□□ 1.45
Rtn4rl1Q8K0S5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn4rl1Q8K0S5 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.12■■□□□ 1.45
Rtn4rl1Q8K0S5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Rtn4rl1Q8K0S5 Gm14523-201ENSMUST00000117260 558 ntBASIC24.11■■□□□ 1.45
Rtn4rl1Q8K0S5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn4rl1Q8K0S5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn4rl1Q8K0S5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn4rl1Q8K0S5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn4rl1Q8K0S5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
Rtn4rl1Q8K0S5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn4rl1Q8K0S5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn4rl1Q8K0S5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Rtn4rl1Q8K0S5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn4rl1Q8K0S5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn4rl1Q8K0S5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn4rl1Q8K0S5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn4rl1Q8K0S5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.08■■□□□ 1.45
Rtn4rl1Q8K0S5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.08■■□□□ 1.45
Rtn4rl1Q8K0S5 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.08■■□□□ 1.45
Rtn4rl1Q8K0S5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rtn4rl1Q8K0S5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Rtn4rl1Q8K0S5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.06■■□□□ 1.44
Rtn4rl1Q8K0S5 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.06■■□□□ 1.44
Rtn4rl1Q8K0S5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rtn4rl1Q8K0S5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.05■■□□□ 1.44
Rtn4rl1Q8K0S5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rtn4rl1Q8K0S5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn4rl1Q8K0S5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rtn4rl1Q8K0S5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.04■■□□□ 1.44
Rtn4rl1Q8K0S5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rtn4rl1Q8K0S5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.02■■□□□ 1.44
Rtn4rl1Q8K0S5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rtn4rl1Q8K0S5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Rtn4rl1Q8K0S5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rtn4rl1Q8K0S5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rtn4rl1Q8K0S5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rtn4rl1Q8K0S5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Rtn4rl1Q8K0S5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Rtn4rl1Q8K0S5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
Rtn4rl1Q8K0S5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn4rl1Q8K0S5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Rtn4rl1Q8K0S5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn4rl1Q8K0S5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rtn4rl1Q8K0S5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rtn4rl1Q8K0S5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.97■■□□□ 1.43
Rtn4rl1Q8K0S5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rtn4rl1Q8K0S5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.96■■□□□ 1.43
Rtn4rl1Q8K0S5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.96■■□□□ 1.43
Rtn4rl1Q8K0S5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.96■■□□□ 1.43
Rtn4rl1Q8K0S5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rtn4rl1Q8K0S5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rtn4rl1Q8K0S5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rtn4rl1Q8K0S5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Rtn4rl1Q8K0S5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn4rl1Q8K0S5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Rtn4rl1Q8K0S5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn4rl1Q8K0S5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn4rl1Q8K0S5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rtn4rl1Q8K0S5 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.93■■□□□ 1.42
Rtn4rl1Q8K0S5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.93■■□□□ 1.42
Rtn4rl1Q8K0S5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rtn4rl1Q8K0S5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.93■■□□□ 1.42
Rtn4rl1Q8K0S5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rtn4rl1Q8K0S5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rtn4rl1Q8K0S5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.92■■□□□ 1.42
Rtn4rl1Q8K0S5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rtn4rl1Q8K0S5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rtn4rl1Q8K0S5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rtn4rl1Q8K0S5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rtn4rl1Q8K0S5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
Rtn4rl1Q8K0S5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms