Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Rab11fip3Q8CHD8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Rab11fip3Q8CHD8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Rab11fip3Q8CHD8 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.5■■■□□ 2.47
Rab11fip3Q8CHD8 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.5■■■□□ 2.47
Rab11fip3Q8CHD8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC30.5■■■□□ 2.47
Rab11fip3Q8CHD8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rab11fip3Q8CHD8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Rab11fip3Q8CHD8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Rab11fip3Q8CHD8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.49■■■□□ 2.47
Rab11fip3Q8CHD8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rab11fip3Q8CHD8 Scarna2-201ENSMUST00000157560 414 ntBASIC30.48■■■□□ 2.47
Rab11fip3Q8CHD8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Rab11fip3Q8CHD8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rab11fip3Q8CHD8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC30.48■■■□□ 2.47
Rab11fip3Q8CHD8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Rab11fip3Q8CHD8 Gm9806-201ENSMUST00000051080 552 ntBASIC30.47■■■□□ 2.47
Rab11fip3Q8CHD8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rab11fip3Q8CHD8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rab11fip3Q8CHD8 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.44■■■□□ 2.46
Rab11fip3Q8CHD8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rab11fip3Q8CHD8 Gm11687-201ENSMUST00000118911 886 ntBASIC30.44■■■□□ 2.46
Rab11fip3Q8CHD8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rab11fip3Q8CHD8 Gm9812-201ENSMUST00000061934 968 ntBASIC30.44■■■□□ 2.46
Rab11fip3Q8CHD8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Rab11fip3Q8CHD8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Rab11fip3Q8CHD8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rab11fip3Q8CHD8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Rab11fip3Q8CHD8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Rab11fip3Q8CHD8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC30.41■■■□□ 2.46
Rab11fip3Q8CHD8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rab11fip3Q8CHD8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Rab11fip3Q8CHD8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rab11fip3Q8CHD8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Rab11fip3Q8CHD8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rab11fip3Q8CHD8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rab11fip3Q8CHD8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rab11fip3Q8CHD8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
Rab11fip3Q8CHD8 Gm16437-201ENSMUST00000025669 507 ntBASIC30.35■■■□□ 2.45
Rab11fip3Q8CHD8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Rab11fip3Q8CHD8 Cap2-205ENSMUST00000225824 1634 ntBASIC30.34■■■□□ 2.45
Rab11fip3Q8CHD8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.34■■■□□ 2.45
Rab11fip3Q8CHD8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC30.33■■■□□ 2.45
Rab11fip3Q8CHD8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Rab11fip3Q8CHD8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Rab11fip3Q8CHD8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC30.31■■■□□ 2.44
Rab11fip3Q8CHD8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.29■■■□□ 2.44
Rab11fip3Q8CHD8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rab11fip3Q8CHD8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rab11fip3Q8CHD8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Rab11fip3Q8CHD8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC30.29■■■□□ 2.44
Rab11fip3Q8CHD8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.28■■■□□ 2.44
Rab11fip3Q8CHD8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC30.28■■■□□ 2.44
Rab11fip3Q8CHD8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Rab11fip3Q8CHD8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rab11fip3Q8CHD8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Rab11fip3Q8CHD8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30.27■■■□□ 2.44
Rab11fip3Q8CHD8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rab11fip3Q8CHD8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Rab11fip3Q8CHD8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC30.26■■■□□ 2.43
Rab11fip3Q8CHD8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rab11fip3Q8CHD8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rab11fip3Q8CHD8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rab11fip3Q8CHD8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rab11fip3Q8CHD8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rab11fip3Q8CHD8 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.25■■■□□ 2.43
Rab11fip3Q8CHD8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Rab11fip3Q8CHD8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Rab11fip3Q8CHD8 AC153911.1-201ENSMUST00000220378 758 ntBASIC30.24■■■□□ 2.43
Rab11fip3Q8CHD8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rab11fip3Q8CHD8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.24■■■□□ 2.43
Rab11fip3Q8CHD8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Rab11fip3Q8CHD8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Rab11fip3Q8CHD8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rab11fip3Q8CHD8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rab11fip3Q8CHD8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Rab11fip3Q8CHD8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rab11fip3Q8CHD8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rab11fip3Q8CHD8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Rab11fip3Q8CHD8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Rab11fip3Q8CHD8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Rab11fip3Q8CHD8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.19■■■□□ 2.42
Rab11fip3Q8CHD8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rab11fip3Q8CHD8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rab11fip3Q8CHD8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rab11fip3Q8CHD8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rab11fip3Q8CHD8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rab11fip3Q8CHD8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC30.16■■■□□ 2.42
Rab11fip3Q8CHD8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Rab11fip3Q8CHD8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rab11fip3Q8CHD8 Gm9910-201ENSMUST00000195385 1550 ntBASIC30.15■■■□□ 2.42
Rab11fip3Q8CHD8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.15■■■□□ 2.42
Rab11fip3Q8CHD8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Rab11fip3Q8CHD8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.14■■■□□ 2.41
Rab11fip3Q8CHD8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Rab11fip3Q8CHD8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Rab11fip3Q8CHD8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Rab11fip3Q8CHD8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC30.13■■■□□ 2.41
Rab11fip3Q8CHD8 Gm12366-201ENSMUST00000121722 873 ntBASIC30.13■■■□□ 2.41
Rab11fip3Q8CHD8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC30.13■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms