Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp28Q8CGV8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp28Q8CGV8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp28Q8CGV8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp28Q8CGV8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp28Q8CGV8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp28Q8CGV8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Mmp28Q8CGV8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Mmp28Q8CGV8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Mmp28Q8CGV8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mmp28Q8CGV8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mmp28Q8CGV8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Mmp28Q8CGV8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Mmp28Q8CGV8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp28Q8CGV8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp28Q8CGV8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mmp28Q8CGV8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp28Q8CGV8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp28Q8CGV8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Mmp28Q8CGV8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp28Q8CGV8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp28Q8CGV8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.67■□□□□ 0.74
Mmp28Q8CGV8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Mmp28Q8CGV8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp28Q8CGV8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp28Q8CGV8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp28Q8CGV8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp28Q8CGV8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Mmp28Q8CGV8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp28Q8CGV8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp28Q8CGV8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp28Q8CGV8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Mmp28Q8CGV8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp28Q8CGV8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp28Q8CGV8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp28Q8CGV8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp28Q8CGV8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp28Q8CGV8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Mmp28Q8CGV8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp28Q8CGV8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.63■□□□□ 0.73
Mmp28Q8CGV8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp28Q8CGV8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp28Q8CGV8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp28Q8CGV8 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.62■□□□□ 0.73
Mmp28Q8CGV8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Mmp28Q8CGV8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp28Q8CGV8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp28Q8CGV8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp28Q8CGV8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Mmp28Q8CGV8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp28Q8CGV8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp28Q8CGV8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp28Q8CGV8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.6■□□□□ 0.73
Mmp28Q8CGV8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.6■□□□□ 0.73
Mmp28Q8CGV8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Mmp28Q8CGV8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Mmp28Q8CGV8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp28Q8CGV8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp28Q8CGV8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp28Q8CGV8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp28Q8CGV8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Mmp28Q8CGV8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp28Q8CGV8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp28Q8CGV8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.58■□□□□ 0.73
Mmp28Q8CGV8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Mmp28Q8CGV8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp28Q8CGV8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp28Q8CGV8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Mmp28Q8CGV8 Notumos-201ENSMUST00000151998 2659 ntBASIC19.56■□□□□ 0.72
Mmp28Q8CGV8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Mmp28Q8CGV8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp28Q8CGV8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp28Q8CGV8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Mmp28Q8CGV8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp28Q8CGV8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp28Q8CGV8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp28Q8CGV8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp28Q8CGV8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp28Q8CGV8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp28Q8CGV8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp28Q8CGV8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp28Q8CGV8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Mmp28Q8CGV8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp28Q8CGV8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Mmp28Q8CGV8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Mmp28Q8CGV8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Mmp28Q8CGV8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp28Q8CGV8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp28Q8CGV8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp28Q8CGV8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp28Q8CGV8 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.52■□□□□ 0.72
Mmp28Q8CGV8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp28Q8CGV8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms