Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.88■■□□□ 1.25
Pcdh19Q80TF3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh19Q80TF3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.86■■□□□ 1.25
Pcdh19Q80TF3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh19Q80TF3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh19Q80TF3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh19Q80TF3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.85■■□□□ 1.25
Pcdh19Q80TF3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh19Q80TF3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.84■■□□□ 1.25
Pcdh19Q80TF3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Pcdh19Q80TF3 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.84■■□□□ 1.25
Pcdh19Q80TF3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh19Q80TF3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.83■■□□□ 1.25
Pcdh19Q80TF3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh19Q80TF3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdh19Q80TF3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh19Q80TF3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh19Q80TF3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.81■■□□□ 1.24
Pcdh19Q80TF3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh19Q80TF3 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.8■■□□□ 1.24
Pcdh19Q80TF3 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.8■■□□□ 1.24
Pcdh19Q80TF3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh19Q80TF3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh19Q80TF3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh19Q80TF3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh19Q80TF3 Scarna2-201ENSMUST00000157560 414 ntBASIC22.79■■□□□ 1.24
Pcdh19Q80TF3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Pcdh19Q80TF3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh19Q80TF3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Gm11687-201ENSMUST00000118911 886 ntBASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Gm45364-201ENSMUST00000210883 159 ntBASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Gm9806-201ENSMUST00000051080 552 ntBASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.78■■□□□ 1.24
Pcdh19Q80TF3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh19Q80TF3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.77■■□□□ 1.24
Pcdh19Q80TF3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh19Q80TF3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Pcdh19Q80TF3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh19Q80TF3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdh19Q80TF3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.75■■□□□ 1.23
Pcdh19Q80TF3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdh19Q80TF3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh19Q80TF3 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.74■■□□□ 1.23
Pcdh19Q80TF3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh19Q80TF3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdh19Q80TF3 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.73■■□□□ 1.23
Pcdh19Q80TF3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh19Q80TF3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Pcdh19Q80TF3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdh19Q80TF3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdh19Q80TF3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Pcdh19Q80TF3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.71■■□□□ 1.23
Pcdh19Q80TF3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdh19Q80TF3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdh19Q80TF3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdh19Q80TF3 Gm16437-201ENSMUST00000025669 507 ntBASIC22.7■■□□□ 1.22
Pcdh19Q80TF3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdh19Q80TF3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.69■■□□□ 1.22
Pcdh19Q80TF3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.68■■□□□ 1.22
Pcdh19Q80TF3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh19Q80TF3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.68■■□□□ 1.22
Pcdh19Q80TF3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh19Q80TF3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdh19Q80TF3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh19Q80TF3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.67■■□□□ 1.22
Pcdh19Q80TF3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh19Q80TF3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdh19Q80TF3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh19Q80TF3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh19Q80TF3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdh19Q80TF3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh19Q80TF3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdh19Q80TF3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Pcdh19Q80TF3 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.64■■□□□ 1.22
Pcdh19Q80TF3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.64■■□□□ 1.21
Pcdh19Q80TF3 Gm9812-201ENSMUST00000061934 968 ntBASIC22.64■■□□□ 1.21
Pcdh19Q80TF3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh19Q80TF3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh19Q80TF3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh19Q80TF3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh19Q80TF3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh19Q80TF3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.62■■□□□ 1.21
Pcdh19Q80TF3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.62■■□□□ 1.21
Pcdh19Q80TF3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh19Q80TF3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh19Q80TF3 Cap2-205ENSMUST00000225824 1634 ntBASIC22.61■■□□□ 1.21
Pcdh19Q80TF3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh19Q80TF3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.61■■□□□ 1.21
Pcdh19Q80TF3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh19Q80TF3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdh19Q80TF3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh19Q80TF3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh19Q80TF3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdh19Q80TF3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.58■■□□□ 1.21
Pcdh19Q80TF3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms