Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.33■■□□□ 1.33
Trappc6aQ78XR0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Trappc6aQ78XR0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trappc6aQ78XR0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trappc6aQ78XR0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
Trappc6aQ78XR0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.33■■□□□ 1.33
Trappc6aQ78XR0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trappc6aQ78XR0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.32■■□□□ 1.32
Trappc6aQ78XR0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trappc6aQ78XR0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.32■■□□□ 1.32
Trappc6aQ78XR0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trappc6aQ78XR0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Trappc6aQ78XR0 Zxda-201ENSMUST00000117281 2621 ntBASIC23.29■■□□□ 1.32
Trappc6aQ78XR0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trappc6aQ78XR0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trappc6aQ78XR0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Trappc6aQ78XR0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trappc6aQ78XR0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Trappc6aQ78XR0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Trappc6aQ78XR0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trappc6aQ78XR0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trappc6aQ78XR0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trappc6aQ78XR0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trappc6aQ78XR0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.25■■□□□ 1.31
Trappc6aQ78XR0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.25■■□□□ 1.31
Trappc6aQ78XR0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trappc6aQ78XR0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Trappc6aQ78XR0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Trappc6aQ78XR0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trappc6aQ78XR0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Trappc6aQ78XR0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trappc6aQ78XR0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trappc6aQ78XR0 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.23■■□□□ 1.31
Trappc6aQ78XR0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trappc6aQ78XR0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Trappc6aQ78XR0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trappc6aQ78XR0 Gm14523-201ENSMUST00000117260 558 ntBASIC23.2■■□□□ 1.3
Trappc6aQ78XR0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trappc6aQ78XR0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trappc6aQ78XR0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trappc6aQ78XR0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trappc6aQ78XR0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trappc6aQ78XR0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trappc6aQ78XR0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trappc6aQ78XR0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trappc6aQ78XR0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Trappc6aQ78XR0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trappc6aQ78XR0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trappc6aQ78XR0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.17■■□□□ 1.3
Trappc6aQ78XR0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.17■■□□□ 1.3
Trappc6aQ78XR0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.16■■□□□ 1.3
Trappc6aQ78XR0 Gm9812-201ENSMUST00000061934 968 ntBASIC23.15■■□□□ 1.3
Trappc6aQ78XR0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trappc6aQ78XR0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trappc6aQ78XR0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trappc6aQ78XR0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Trappc6aQ78XR0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trappc6aQ78XR0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.13■■□□□ 1.29
Trappc6aQ78XR0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trappc6aQ78XR0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trappc6aQ78XR0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.12■■□□□ 1.29
Trappc6aQ78XR0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Trappc6aQ78XR0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trappc6aQ78XR0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.11■■□□□ 1.29
Trappc6aQ78XR0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Trappc6aQ78XR0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trappc6aQ78XR0 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.1■■□□□ 1.29
Trappc6aQ78XR0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trappc6aQ78XR0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Trappc6aQ78XR0 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.09■■□□□ 1.29
Trappc6aQ78XR0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trappc6aQ78XR0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trappc6aQ78XR0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trappc6aQ78XR0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trappc6aQ78XR0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trappc6aQ78XR0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trappc6aQ78XR0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.06■■□□□ 1.28
Trappc6aQ78XR0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Trappc6aQ78XR0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.05■■□□□ 1.28
Trappc6aQ78XR0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.05■■□□□ 1.28
Trappc6aQ78XR0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trappc6aQ78XR0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
Trappc6aQ78XR0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trappc6aQ78XR0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trappc6aQ78XR0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Trappc6aQ78XR0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms