Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.54■■□□□ 1.36
Sdf4Q61112 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sdf4Q61112 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Sdf4Q61112 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.53■■□□□ 1.36
Sdf4Q61112 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
Sdf4Q61112 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sdf4Q61112 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.52■■□□□ 1.36
Sdf4Q61112 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.52■■□□□ 1.36
Sdf4Q61112 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.52■■□□□ 1.36
Sdf4Q61112 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sdf4Q61112 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Sdf4Q61112 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Sdf4Q61112 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sdf4Q61112 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.5■■□□□ 1.35
Sdf4Q61112 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sdf4Q61112 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sdf4Q61112 Gm37136-201ENSMUST00000194368 194 ntBASIC23.49■■□□□ 1.35
Sdf4Q61112 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sdf4Q61112 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sdf4Q61112 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sdf4Q61112 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Sdf4Q61112 Gm7432-201ENSMUST00000210343 879 ntBASIC23.48■■□□□ 1.35
Sdf4Q61112 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sdf4Q61112 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sdf4Q61112 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.47■■□□□ 1.35
Sdf4Q61112 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.47■■□□□ 1.35
Sdf4Q61112 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Sdf4Q61112 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Sdf4Q61112 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sdf4Q61112 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sdf4Q61112 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Sdf4Q61112 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sdf4Q61112 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.44■■□□□ 1.34
Sdf4Q61112 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Sdf4Q61112 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Sdf4Q61112 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sdf4Q61112 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sdf4Q61112 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Sdf4Q61112 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sdf4Q61112 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sdf4Q61112 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.42■■□□□ 1.34
Sdf4Q61112 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Sdf4Q61112 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Sdf4Q61112 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Sdf4Q61112 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sdf4Q61112 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Sdf4Q61112 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.4■■□□□ 1.34
Sdf4Q61112 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Sdf4Q61112 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Sdf4Q61112 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sdf4Q61112 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
Sdf4Q61112 Gm11599-201ENSMUST00000118720 878 ntBASIC23.38■■□□□ 1.33
Sdf4Q61112 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Sdf4Q61112 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sdf4Q61112 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Sdf4Q61112 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sdf4Q61112 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sdf4Q61112 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sdf4Q61112 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.36■■□□□ 1.33
Sdf4Q61112 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Sdf4Q61112 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sdf4Q61112 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sdf4Q61112 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sdf4Q61112 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.34■■□□□ 1.33
Sdf4Q61112 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sdf4Q61112 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Sdf4Q61112 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sdf4Q61112 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Sdf4Q61112 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
Sdf4Q61112 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Sdf4Q61112 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sdf4Q61112 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.32■■□□□ 1.32
Sdf4Q61112 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sdf4Q61112 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Sdf4Q61112 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sdf4Q61112 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sdf4Q61112 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sdf4Q61112 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Sdf4Q61112 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sdf4Q61112 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
Sdf4Q61112 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sdf4Q61112 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sdf4Q61112 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sdf4Q61112 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
Sdf4Q61112 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sdf4Q61112 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sdf4Q61112 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sdf4Q61112 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
Sdf4Q61112 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sdf4Q61112 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sdf4Q61112 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sdf4Q61112 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sdf4Q61112 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Sdf4Q61112 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sdf4Q61112 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sdf4Q61112 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sdf4Q61112 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Sdf4Q61112 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sdf4Q61112 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sdf4Q61112 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms