Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ush2AQ2QI47 Mir3960-201ENSMUST00000198213 73 ntBASIC13.26□□□□□ -0.29
Ush2AQ2QI47 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush2AQ2QI47 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush2AQ2QI47 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ush2AQ2QI47 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.26□□□□□ -0.29
Ush2AQ2QI47 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.26□□□□□ -0.29
Ush2AQ2QI47 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ush2AQ2QI47 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ush2AQ2QI47 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush2AQ2QI47 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush2AQ2QI47 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ush2AQ2QI47 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ush2AQ2QI47 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush2AQ2QI47 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush2AQ2QI47 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush2AQ2QI47 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush2AQ2QI47 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.22□□□□□ -0.29
Ush2AQ2QI47 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.22□□□□□ -0.29
Ush2AQ2QI47 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush2AQ2QI47 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush2AQ2QI47 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.21□□□□□ -0.29
Ush2AQ2QI47 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush2AQ2QI47 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush2AQ2QI47 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.21□□□□□ -0.29
Ush2AQ2QI47 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush2AQ2QI47 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush2AQ2QI47 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ush2AQ2QI47 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush2AQ2QI47 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush2AQ2QI47 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.2□□□□□ -0.3
Ush2AQ2QI47 Gm9910-201ENSMUST00000195385 1550 ntBASIC13.2□□□□□ -0.3
Ush2AQ2QI47 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Gm30023-201ENSMUST00000197970 889 ntBASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.19□□□□□ -0.3
Ush2AQ2QI47 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush2AQ2QI47 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ush2AQ2QI47 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.18□□□□□ -0.3
Ush2AQ2QI47 Gm29257-201ENSMUST00000186115 639 ntBASIC13.18□□□□□ -0.3
Ush2AQ2QI47 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ush2AQ2QI47 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.17□□□□□ -0.3
Ush2AQ2QI47 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush2AQ2QI47 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ush2AQ2QI47 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.17□□□□□ -0.3
Ush2AQ2QI47 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ush2AQ2QI47 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.17□□□□□ -0.3
Ush2AQ2QI47 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ush2AQ2QI47 Gm21956-201ENSMUST00000179946 522 ntBASIC13.16□□□□□ -0.3
Ush2AQ2QI47 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush2AQ2QI47 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ush2AQ2QI47 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.15□□□□□ -0.3
Ush2AQ2QI47 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ush2AQ2QI47 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.14□□□□□ -0.31
Ush2AQ2QI47 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush2AQ2QI47 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.13□□□□□ -0.31
Ush2AQ2QI47 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush2AQ2QI47 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.13□□□□□ -0.31
Ush2AQ2QI47 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush2AQ2QI47 Gm43566-201ENSMUST00000196851 808 ntBASIC13.12□□□□□ -0.31
Ush2AQ2QI47 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC13.12□□□□□ -0.31
Ush2AQ2QI47 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.12□□□□□ -0.31
Ush2AQ2QI47 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush2AQ2QI47 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush2AQ2QI47 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush2AQ2QI47 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush2AQ2QI47 Gm37847-201ENSMUST00000192163 1497 ntBASIC13.11□□□□□ -0.31
Ush2AQ2QI47 Gm31748-201ENSMUST00000194938 1497 ntBASIC13.11□□□□□ -0.31
Ush2AQ2QI47 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ush2AQ2QI47 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ush2AQ2QI47 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ush2AQ2QI47 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC13.1□□□□□ -0.31
Ush2AQ2QI47 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ush2AQ2QI47 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.1□□□□□ -0.31
Ush2AQ2QI47 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ush2AQ2QI47 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ush2AQ2QI47 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ush2AQ2QI47 Etf1-202ENSMUST00000180351 108 ntBASIC13.09□□□□□ -0.31
Ush2AQ2QI47 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ush2AQ2QI47 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ush2AQ2QI47 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms