Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.03■■□□□ 1.12
Chd8Q09XV5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd8Q09XV5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd8Q09XV5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd8Q09XV5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd8Q09XV5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.02■■□□□ 1.12
Chd8Q09XV5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd8Q09XV5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd8Q09XV5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Chd8Q09XV5 Nsd1-203ENSMUST00000224156 1149 ntBASIC22■■□□□ 1.11
Chd8Q09XV5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd8Q09XV5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd8Q09XV5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd8Q09XV5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chd8Q09XV5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chd8Q09XV5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Chd8Q09XV5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.97■■□□□ 1.11
Chd8Q09XV5 Gm13241-201ENSMUST00000094493 780 ntBASIC21.97■■□□□ 1.11
Chd8Q09XV5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chd8Q09XV5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chd8Q09XV5 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.96■■□□□ 1.11
Chd8Q09XV5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Chd8Q09XV5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.95■■□□□ 1.11
Chd8Q09XV5 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.95■■□□□ 1.1
Chd8Q09XV5 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.95■■□□□ 1.1
Chd8Q09XV5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chd8Q09XV5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chd8Q09XV5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Chd8Q09XV5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Chd8Q09XV5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.94■■□□□ 1.1
Chd8Q09XV5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.93■■□□□ 1.1
Chd8Q09XV5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.93■■□□□ 1.1
Chd8Q09XV5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Chd8Q09XV5 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.92■■□□□ 1.1
Chd8Q09XV5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Chd8Q09XV5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chd8Q09XV5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Chd8Q09XV5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Chd8Q09XV5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd8Q09XV5 Gm43566-201ENSMUST00000196851 808 ntBASIC21.9■■□□□ 1.1
Chd8Q09XV5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Chd8Q09XV5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chd8Q09XV5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Chd8Q09XV5 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.89■■□□□ 1.09
Chd8Q09XV5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd8Q09XV5 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.88■■□□□ 1.09
Chd8Q09XV5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Chd8Q09XV5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Chd8Q09XV5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.86■■□□□ 1.09
Chd8Q09XV5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Chd8Q09XV5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
Chd8Q09XV5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chd8Q09XV5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chd8Q09XV5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Chd8Q09XV5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Chd8Q09XV5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chd8Q09XV5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.85■■□□□ 1.09
Chd8Q09XV5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chd8Q09XV5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Chd8Q09XV5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
Chd8Q09XV5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chd8Q09XV5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Chd8Q09XV5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Chd8Q09XV5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.82■■□□□ 1.08
Chd8Q09XV5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd8Q09XV5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd8Q09XV5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd8Q09XV5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chd8Q09XV5 Gm29257-201ENSMUST00000186115 639 ntBASIC21.81■■□□□ 1.08
Chd8Q09XV5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.81■■□□□ 1.08
Chd8Q09XV5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chd8Q09XV5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Chd8Q09XV5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd8Q09XV5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd8Q09XV5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Chd8Q09XV5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.8■■□□□ 1.08
Chd8Q09XV5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Chd8Q09XV5 Gm21956-201ENSMUST00000179946 522 ntBASIC21.79■■□□□ 1.08
Chd8Q09XV5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.79■■□□□ 1.08
Chd8Q09XV5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.78■■□□□ 1.08
Chd8Q09XV5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chd8Q09XV5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Chd8Q09XV5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd8Q09XV5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Chd8Q09XV5 Etf1-202ENSMUST00000180351 108 ntBASIC21.77■■□□□ 1.08
Chd8Q09XV5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.77■■□□□ 1.08
Chd8Q09XV5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd8Q09XV5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chd8Q09XV5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd8Q09XV5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Chd8Q09XV5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Chd8Q09XV5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Chd8Q09XV5 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd8Q09XV5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Chd8Q09XV5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd8Q09XV5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd8Q09XV5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.73■■□□□ 1.07
Chd8Q09XV5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chd8Q09XV5 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.73■■□□□ 1.07
Chd8Q09XV5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms