Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm6P62313 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.41■□□□□ 0.86
Lsm6P62313 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm6P62313 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm6P62313 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm6P62313 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsm6P62313 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm6P62313 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsm6P62313 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lsm6P62313 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Lsm6P62313 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm6P62313 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsm6P62313 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.38■□□□□ 0.85
Lsm6P62313 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Lsm6P62313 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm6P62313 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm6P62313 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm6P62313 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lsm6P62313 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Lsm6P62313 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Lsm6P62313 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm6P62313 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm6P62313 Gm8503-201ENSMUST00000118131 455 ntBASIC20.35■□□□□ 0.85
Lsm6P62313 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm6P62313 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm6P62313 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.34■□□□□ 0.85
Lsm6P62313 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm6P62313 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm6P62313 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm6P62313 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm6P62313 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm6P62313 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm6P62313 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm6P62313 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm6P62313 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm6P62313 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm6P62313 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm6P62313 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm6P62313 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.3■□□□□ 0.84
Lsm6P62313 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lsm6P62313 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Lsm6P62313 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm6P62313 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm6P62313 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm6P62313 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm6P62313 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm6P62313 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm6P62313 Gm37136-201ENSMUST00000194368 194 ntBASIC20.28■□□□□ 0.84
Lsm6P62313 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm6P62313 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lsm6P62313 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Lsm6P62313 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm6P62313 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm6P62313 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Lsm6P62313 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm6P62313 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm6P62313 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm6P62313 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm6P62313 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm6P62313 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lsm6P62313 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm6P62313 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lsm6P62313 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.24■□□□□ 0.83
Lsm6P62313 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm6P62313 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lsm6P62313 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Lsm6P62313 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm6P62313 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm6P62313 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.22■□□□□ 0.83
Lsm6P62313 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm6P62313 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm6P62313 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lsm6P62313 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm6P62313 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lsm6P62313 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.21■□□□□ 0.83
Lsm6P62313 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.21■□□□□ 0.83
Lsm6P62313 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm6P62313 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm6P62313 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lsm6P62313 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lsm6P62313 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm6P62313 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lsm6P62313 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lsm6P62313 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.19■□□□□ 0.82
Lsm6P62313 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm6P62313 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.18■□□□□ 0.82
Lsm6P62313 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm6P62313 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm6P62313 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lsm6P62313 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm6P62313 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.17■□□□□ 0.82
Lsm6P62313 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm6P62313 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lsm6P62313 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm6P62313 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm6P62313 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lsm6P62313 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lsm6P62313 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.16■□□□□ 0.82
Lsm6P62313 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.15■□□□□ 0.82
Lsm6P62313 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms