Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccr1l1P51676 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Ccr1l1P51676 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1l1P51676 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1l1P51676 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccr1l1P51676 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccr1l1P51676 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21■□□□□ 0.95
Ccr1l1P51676 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccr1l1P51676 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccr1l1P51676 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccr1l1P51676 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.97■□□□□ 0.95
Ccr1l1P51676 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccr1l1P51676 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.96■□□□□ 0.95
Ccr1l1P51676 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccr1l1P51676 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccr1l1P51676 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1l1P51676 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccr1l1P51676 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccr1l1P51676 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1l1P51676 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1l1P51676 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccr1l1P51676 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1l1P51676 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccr1l1P51676 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccr1l1P51676 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.92■□□□□ 0.94
Ccr1l1P51676 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.91■□□□□ 0.94
Ccr1l1P51676 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr1l1P51676 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccr1l1P51676 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.9■□□□□ 0.94
Ccr1l1P51676 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccr1l1P51676 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr1l1P51676 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr1l1P51676 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ccr1l1P51676 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ccr1l1P51676 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1l1P51676 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1l1P51676 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1l1P51676 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccr1l1P51676 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccr1l1P51676 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccr1l1P51676 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ccr1l1P51676 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccr1l1P51676 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.86■□□□□ 0.93
Ccr1l1P51676 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccr1l1P51676 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccr1l1P51676 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Ccr1l1P51676 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccr1l1P51676 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.85■□□□□ 0.93
Ccr1l1P51676 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccr1l1P51676 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ccr1l1P51676 Gm4799-201ENSMUST00000095396 657 ntBASIC20.84■□□□□ 0.93
Ccr1l1P51676 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.84■□□□□ 0.93
Ccr1l1P51676 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccr1l1P51676 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ccr1l1P51676 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Ccr1l1P51676 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccr1l1P51676 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ccr1l1P51676 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.82■□□□□ 0.92
Ccr1l1P51676 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ccr1l1P51676 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccr1l1P51676 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccr1l1P51676 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ccr1l1P51676 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccr1l1P51676 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ccr1l1P51676 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Ccr1l1P51676 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccr1l1P51676 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccr1l1P51676 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccr1l1P51676 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccr1l1P51676 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccr1l1P51676 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccr1l1P51676 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccr1l1P51676 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccr1l1P51676 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ccr1l1P51676 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr1l1P51676 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr1l1P51676 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr1l1P51676 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr1l1P51676 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr1l1P51676 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ccr1l1P51676 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr1l1P51676 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccr1l1P51676 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ccr1l1P51676 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.77■□□□□ 0.92
Ccr1l1P51676 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Ccr1l1P51676 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccr1l1P51676 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Ccr1l1P51676 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccr1l1P51676 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccr1l1P51676 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.77■□□□□ 0.91
Ccr1l1P51676 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.76■□□□□ 0.91
Ccr1l1P51676 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccr1l1P51676 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccr1l1P51676 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.75■□□□□ 0.91
Ccr1l1P51676 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.75■□□□□ 0.91
Ccr1l1P51676 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccr1l1P51676 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccr1l1P51676 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ccr1l1P51676 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccr1l1P51676 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms