Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nkx2-6P43688 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.08■■□□□ 1.13
Nkx2-6P43688 Gm9806-201ENSMUST00000051080 552 ntBASIC22.08■■□□□ 1.13
Nkx2-6P43688 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nkx2-6P43688 Scarna2-201ENSMUST00000157560 414 ntBASIC22.07■■□□□ 1.12
Nkx2-6P43688 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx2-6P43688 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nkx2-6P43688 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Nkx2-6P43688 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Nkx2-6P43688 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Nkx2-6P43688 Gm45364-201ENSMUST00000210883 159 ntBASIC22.06■■□□□ 1.12
Nkx2-6P43688 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nkx2-6P43688 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Gm11687-201ENSMUST00000118911 886 ntBASIC22.04■■□□□ 1.12
Nkx2-6P43688 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Nkx2-6P43688 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nkx2-6P43688 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.03■■□□□ 1.12
Nkx2-6P43688 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx2-6P43688 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx2-6P43688 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx2-6P43688 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Nkx2-6P43688 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Nkx2-6P43688 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.01■■□□□ 1.11
Nkx2-6P43688 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.01■■□□□ 1.11
Nkx2-6P43688 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx2-6P43688 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx2-6P43688 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nkx2-6P43688 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nkx2-6P43688 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nkx2-6P43688 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22■■□□□ 1.11
Nkx2-6P43688 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nkx2-6P43688 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Nkx2-6P43688 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx2-6P43688 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx2-6P43688 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.99■■□□□ 1.11
Nkx2-6P43688 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nkx2-6P43688 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Nkx2-6P43688 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nkx2-6P43688 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Nkx2-6P43688 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nkx2-6P43688 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Nkx2-6P43688 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkx2-6P43688 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nkx2-6P43688 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Nkx2-6P43688 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nkx2-6P43688 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nkx2-6P43688 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.95■■□□□ 1.1
Nkx2-6P43688 Gm12366-201ENSMUST00000121722 873 ntBASIC21.95■■□□□ 1.1
Nkx2-6P43688 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.95■■□□□ 1.1
Nkx2-6P43688 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nkx2-6P43688 Gm16437-201ENSMUST00000025669 507 ntBASIC21.95■■□□□ 1.1
Nkx2-6P43688 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.95■■□□□ 1.1
Nkx2-6P43688 Gm5786-201ENSMUST00000085368 882 ntBASIC21.95■■□□□ 1.1
Nkx2-6P43688 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nkx2-6P43688 Gm9812-201ENSMUST00000061934 968 ntBASIC21.94■■□□□ 1.1
Nkx2-6P43688 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Nkx2-6P43688 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nkx2-6P43688 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Nkx2-6P43688 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nkx2-6P43688 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nkx2-6P43688 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nkx2-6P43688 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx2-6P43688 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.9■■□□□ 1.1
Nkx2-6P43688 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nkx2-6P43688 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nkx2-6P43688 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nkx2-6P43688 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.89■■□□□ 1.09
Nkx2-6P43688 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nkx2-6P43688 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
Nkx2-6P43688 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nkx2-6P43688 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx2-6P43688 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx2-6P43688 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx2-6P43688 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nkx2-6P43688 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-6P43688 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-6P43688 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkx2-6P43688 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-6P43688 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-6P43688 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Nkx2-6P43688 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-6P43688 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.86■■□□□ 1.09
Nkx2-6P43688 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-6P43688 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-6P43688 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkx2-6P43688 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-6P43688 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.85■■□□□ 1.09
Nkx2-6P43688 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.85■■□□□ 1.09
Nkx2-6P43688 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-6P43688 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-6P43688 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-6P43688 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nkx2-6P43688 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms