Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm15039-201ENSMUST00000118914 875 ntBASIC35.2■■■■□ 3.23
Kdm5cP41230 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC35.19■■■■□ 3.22
Kdm5cP41230 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC35.18■■■■□ 3.22
Kdm5cP41230 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Kdm5cP41230 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC35.17■■■■□ 3.22
Kdm5cP41230 Gm9910-201ENSMUST00000195385 1550 ntBASIC35.16■■■■□ 3.22
Kdm5cP41230 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC35.16■■■■□ 3.22
Kdm5cP41230 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC35.16■■■■□ 3.22
Kdm5cP41230 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC35.15■■■■□ 3.22
Kdm5cP41230 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Kdm5cP41230 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
Kdm5cP41230 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC35.15■■■■□ 3.22
Kdm5cP41230 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC35.14■■■■□ 3.22
Kdm5cP41230 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Kdm5cP41230 Gm5921-201ENSMUST00000075898 882 ntBASIC35.14■■■■□ 3.22
Kdm5cP41230 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC35.13■■■■□ 3.21
Kdm5cP41230 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Kdm5cP41230 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC35.13■■■■□ 3.21
Kdm5cP41230 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Kdm5cP41230 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC35.12■■■■□ 3.21
Kdm5cP41230 Gm10420-201ENSMUST00000121713 882 ntBASIC35.12■■■■□ 3.21
Kdm5cP41230 Gm5067-201ENSMUST00000170449 1009 ntBASIC35.12■■■■□ 3.21
Kdm5cP41230 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Kdm5cP41230 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Kdm5cP41230 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Kdm5cP41230 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
Kdm5cP41230 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Kdm5cP41230 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Kdm5cP41230 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Kdm5cP41230 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC35.1■■■■□ 3.21
Kdm5cP41230 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
Kdm5cP41230 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC35.1■■■■□ 3.21
Kdm5cP41230 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC35.1■■■■□ 3.21
Kdm5cP41230 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Kdm5cP41230 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Kdm5cP41230 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC35.08■■■■□ 3.21
Kdm5cP41230 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC35.08■■■■□ 3.21
Kdm5cP41230 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
Kdm5cP41230 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC35.08■■■■□ 3.21
Kdm5cP41230 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Kdm5cP41230 Gm9812-201ENSMUST00000061934 968 ntBASIC35.07■■■■□ 3.2
Kdm5cP41230 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Kdm5cP41230 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC35.04■■■■□ 3.2
Kdm5cP41230 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Kdm5cP41230 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Kdm5cP41230 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Kdm5cP41230 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Kdm5cP41230 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC35.02■■■■□ 3.2
Kdm5cP41230 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Kdm5cP41230 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
Kdm5cP41230 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC35.01■■■■□ 3.19
Kdm5cP41230 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
Kdm5cP41230 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Kdm5cP41230 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Kdm5cP41230 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC34.96■■■■□ 3.19
Kdm5cP41230 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Kdm5cP41230 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
Kdm5cP41230 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC34.95■■■■□ 3.18
Kdm5cP41230 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Kdm5cP41230 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Kdm5cP41230 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC34.94■■■■□ 3.18
Kdm5cP41230 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC34.93■■■■□ 3.18
Kdm5cP41230 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Kdm5cP41230 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC34.92■■■■□ 3.18
Kdm5cP41230 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Kdm5cP41230 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC34.91■■■■□ 3.18
Kdm5cP41230 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC34.91■■■■□ 3.18
Kdm5cP41230 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Kdm5cP41230 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
Kdm5cP41230 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Kdm5cP41230 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Kdm5cP41230 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
Kdm5cP41230 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC34.87■■■■□ 3.17
Kdm5cP41230 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Kdm5cP41230 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Kdm5cP41230 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Kdm5cP41230 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Kdm5cP41230 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC34.85■■■■□ 3.17
Kdm5cP41230 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC34.84■■■■□ 3.17
Kdm5cP41230 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC34.83■■■■□ 3.17
Kdm5cP41230 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
Kdm5cP41230 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC34.82■■■■□ 3.16
Kdm5cP41230 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC34.81■■■■□ 3.16
Kdm5cP41230 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Kdm5cP41230 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Kdm5cP41230 Gm5522-201ENSMUST00000189483 1242 ntBASIC34.81■■■■□ 3.16
Kdm5cP41230 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC34.81■■■■□ 3.16
Kdm5cP41230 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
Kdm5cP41230 AC153911.1-201ENSMUST00000220378 758 ntBASIC34.79■■■■□ 3.16
Kdm5cP41230 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Kdm5cP41230 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC34.79■■■■□ 3.16
Kdm5cP41230 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Kdm5cP41230 Gm15546-201ENSMUST00000122095 826 ntBASIC34.77■■■■□ 3.16
Kdm5cP41230 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Kdm5cP41230 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Kdm5cP41230 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC34.75■■■■□ 3.15
Kdm5cP41230 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Kdm5cP41230 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
Kdm5cP41230 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
Kdm5cP41230 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms