Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cxcl1P12850 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cxcl1P12850 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cxcl1P12850 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.25■□□□□ 0.67
Cxcl1P12850 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cxcl1P12850 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cxcl1P12850 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cxcl1P12850 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cxcl1P12850 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.23■□□□□ 0.67
Cxcl1P12850 Gm30023-201ENSMUST00000197970 889 ntBASIC19.23■□□□□ 0.67
Cxcl1P12850 Zfp131-205ENSMUST00000223812 663 ntBASIC19.23■□□□□ 0.67
Cxcl1P12850 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cxcl1P12850 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl1P12850 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl1P12850 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl1P12850 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.22■□□□□ 0.67
Cxcl1P12850 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.22■□□□□ 0.67
Cxcl1P12850 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.22■□□□□ 0.67
Cxcl1P12850 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cxcl1P12850 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl1P12850 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl1P12850 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl1P12850 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cxcl1P12850 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl1P12850 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl1P12850 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cxcl1P12850 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl1P12850 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cxcl1P12850 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl1P12850 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cxcl1P12850 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.19■□□□□ 0.66
Cxcl1P12850 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cxcl1P12850 Gm24970-201ENSMUST00000175582 82 ntBASIC19.18■□□□□ 0.66
Cxcl1P12850 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl1P12850 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cxcl1P12850 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl1P12850 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl1P12850 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl1P12850 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cxcl1P12850 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cxcl1P12850 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cxcl1P12850 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.16■□□□□ 0.66
Cxcl1P12850 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl1P12850 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Cxcl1P12850 Gm9397-201ENSMUST00000200125 605 ntBASIC19.15■□□□□ 0.66
Cxcl1P12850 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Cxcl1P12850 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cxcl1P12850 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cxcl1P12850 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl1P12850 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl1P12850 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl1P12850 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl1P12850 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cxcl1P12850 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.13■□□□□ 0.65
Cxcl1P12850 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cxcl1P12850 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl1P12850 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl1P12850 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cxcl1P12850 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl1P12850 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl1P12850 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl1P12850 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cxcl1P12850 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl1P12850 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.1■□□□□ 0.65
Cxcl1P12850 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cxcl1P12850 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cxcl1P12850 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.09■□□□□ 0.65
Cxcl1P12850 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl1P12850 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl1P12850 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl1P12850 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cxcl1P12850 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cxcl1P12850 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.08■□□□□ 0.65
Cxcl1P12850 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl1P12850 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cxcl1P12850 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.07■□□□□ 0.64
Cxcl1P12850 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl1P12850 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Cxcl1P12850 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl1P12850 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cxcl1P12850 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cxcl1P12850 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cxcl1P12850 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cxcl1P12850 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cxcl1P12850 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cxcl1P12850 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cxcl1P12850 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl1P12850 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl1P12850 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cxcl1P12850 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cxcl1P12850 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl1P12850 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cxcl1P12850 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cxcl1P12850 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cxcl1P12850 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cxcl1P12850 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cxcl1P12850 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cxcl1P12850 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl1P12850 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cxcl1P12850 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms