Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
NclP09405 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
NclP09405 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
NclP09405 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC34.69■■■■□ 3.14
NclP09405 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
NclP09405 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC34.69■■■■□ 3.14
NclP09405 Cap2-205ENSMUST00000225824 1634 ntBASIC34.69■■■■□ 3.14
NclP09405 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
NclP09405 Gm9806-201ENSMUST00000051080 552 ntBASIC34.68■■■■□ 3.14
NclP09405 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC34.67■■■■□ 3.14
NclP09405 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
NclP09405 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
NclP09405 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
NclP09405 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
NclP09405 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
NclP09405 Gm11687-201ENSMUST00000118911 886 ntBASIC34.64■■■■□ 3.14
NclP09405 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Gm12818-201ENSMUST00000117562 1349 ntBASIC34.63■■■■□ 3.13
NclP09405 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Gm16437-201ENSMUST00000025669 507 ntBASIC34.61■■■■□ 3.13
NclP09405 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC34.61■■■■□ 3.13
NclP09405 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC34.59■■■■□ 3.13
NclP09405 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
NclP09405 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
NclP09405 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC34.58■■■■□ 3.13
NclP09405 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.13
NclP09405 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC34.57■■■■□ 3.12
NclP09405 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
NclP09405 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC34.56■■■■□ 3.12
NclP09405 Gm37847-201ENSMUST00000192163 1497 ntBASIC34.56■■■■□ 3.12
NclP09405 Gm31748-201ENSMUST00000194938 1497 ntBASIC34.56■■■■□ 3.12
NclP09405 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC34.55■■■■□ 3.12
NclP09405 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
NclP09405 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NclP09405 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC34.51■■■■□ 3.12
NclP09405 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC34.51■■■■□ 3.12
NclP09405 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
NclP09405 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
NclP09405 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
NclP09405 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
NclP09405 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
NclP09405 Gm9812-201ENSMUST00000061934 968 ntBASIC34.48■■■■□ 3.11
NclP09405 Gm14121-201ENSMUST00000121441 1380 ntBASIC34.48■■■■□ 3.11
NclP09405 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC34.47■■■■□ 3.11
NclP09405 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
NclP09405 Fezf2-202ENSMUST00000224023 1917 ntBASIC34.47■■■■□ 3.11
NclP09405 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC34.45■■■■□ 3.11
NclP09405 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
NclP09405 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
NclP09405 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
NclP09405 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC34.43■■■■□ 3.1
NclP09405 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
NclP09405 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
NclP09405 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
NclP09405 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC34.41■■■■□ 3.1
NclP09405 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
NclP09405 AC122317.2-201ENSMUST00000218708 1248 ntBASIC34.4■■■■□ 3.1
NclP09405 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
NclP09405 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NclP09405 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
NclP09405 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
NclP09405 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
NclP09405 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
NclP09405 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
NclP09405 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC34.34■■■■□ 3.09
NclP09405 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC34.34■■■■□ 3.09
NclP09405 Gm12366-201ENSMUST00000121722 873 ntBASIC34.34■■■■□ 3.09
NclP09405 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC34.34■■■■□ 3.09
NclP09405 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC34.34■■■■□ 3.09
NclP09405 Gm5786-201ENSMUST00000085368 882 ntBASIC34.34■■■■□ 3.09
NclP09405 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
NclP09405 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC34.33■■■■□ 3.09
NclP09405 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
NclP09405 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC34.33■■■■□ 3.09
NclP09405 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC34.32■■■■□ 3.09
NclP09405 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
NclP09405 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
NclP09405 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC34.32■■■■□ 3.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms