Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
NclP09405 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
NclP09405 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC34.71■■■■□ 3.15
NclP09405 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC34.69■■■■□ 3.14
NclP09405 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
NclP09405 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC34.69■■■■□ 3.14
NclP09405 Cap2-205ENSMUST00000225824 1634 ntBASIC34.69■■■■□ 3.14
NclP09405 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
NclP09405 Gm9806-201ENSMUST00000051080 552 ntBASIC34.68■■■■□ 3.14
NclP09405 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC34.67■■■■□ 3.14
NclP09405 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
NclP09405 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
NclP09405 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
NclP09405 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
NclP09405 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC34.65■■■■□ 3.14
NclP09405 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
NclP09405 Gm11687-201ENSMUST00000118911 886 ntBASIC34.64■■■■□ 3.14
NclP09405 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Gm12818-201ENSMUST00000117562 1349 ntBASIC34.63■■■■□ 3.13
NclP09405 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC34.63■■■■□ 3.13
NclP09405 Gm16437-201ENSMUST00000025669 507 ntBASIC34.61■■■■□ 3.13
NclP09405 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC34.61■■■■□ 3.13
NclP09405 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
NclP09405 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC34.59■■■■□ 3.13
NclP09405 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
NclP09405 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
NclP09405 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC34.58■■■■□ 3.13
NclP09405 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
NclP09405 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.13
NclP09405 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC34.57■■■■□ 3.12
NclP09405 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
NclP09405 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC34.56■■■■□ 3.12
NclP09405 Gm37847-201ENSMUST00000192163 1497 ntBASIC34.56■■■■□ 3.12
NclP09405 Gm31748-201ENSMUST00000194938 1497 ntBASIC34.56■■■■□ 3.12
NclP09405 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC34.55■■■■□ 3.12
NclP09405 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
NclP09405 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
NclP09405 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC34.51■■■■□ 3.12
NclP09405 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC34.51■■■■□ 3.12
NclP09405 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
NclP09405 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
NclP09405 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
NclP09405 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
NclP09405 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
NclP09405 Gm9812-201ENSMUST00000061934 968 ntBASIC34.48■■■■□ 3.11
NclP09405 Gm14121-201ENSMUST00000121441 1380 ntBASIC34.48■■■■□ 3.11
NclP09405 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC34.47■■■■□ 3.11
NclP09405 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
NclP09405 Fezf2-202ENSMUST00000224023 1917 ntBASIC34.47■■■■□ 3.11
NclP09405 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC34.45■■■■□ 3.11
NclP09405 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
NclP09405 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC34.44■■■■□ 3.1
NclP09405 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
NclP09405 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC34.43■■■■□ 3.1
NclP09405 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
NclP09405 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
NclP09405 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC34.41■■■■□ 3.1
NclP09405 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC34.41■■■■□ 3.1
NclP09405 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
NclP09405 AC122317.2-201ENSMUST00000218708 1248 ntBASIC34.4■■■■□ 3.1
NclP09405 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
NclP09405 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
NclP09405 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
NclP09405 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
NclP09405 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
NclP09405 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
NclP09405 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
NclP09405 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
NclP09405 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC34.34■■■■□ 3.09
NclP09405 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC34.34■■■■□ 3.09
NclP09405 Gm12366-201ENSMUST00000121722 873 ntBASIC34.34■■■■□ 3.09
NclP09405 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC34.34■■■■□ 3.09
NclP09405 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC34.34■■■■□ 3.09
NclP09405 Gm5786-201ENSMUST00000085368 882 ntBASIC34.34■■■■□ 3.09
NclP09405 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
NclP09405 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC34.33■■■■□ 3.09
NclP09405 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
NclP09405 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC34.33■■■■□ 3.09
NclP09405 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC34.32■■■■□ 3.09
NclP09405 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
NclP09405 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
NclP09405 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC34.32■■■■□ 3.08
Retrieved 100 of 76,532 protein–RNA pairs in 128.2 ms