Protein–RNA interactions for Protein: P08551

Nefl, Neurofilament light polypeptide, mousemouse

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NeflP08551 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
NeflP08551 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
NeflP08551 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
NeflP08551 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
NeflP08551 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
NeflP08551 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
NeflP08551 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
NeflP08551 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
NeflP08551 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NeflP08551 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
NeflP08551 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.01■■■□□ 2.39
NeflP08551 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
NeflP08551 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
NeflP08551 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
NeflP08551 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30■■■□□ 2.39
NeflP08551 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30■■■□□ 2.39
NeflP08551 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
NeflP08551 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.99■■■□□ 2.39
NeflP08551 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
NeflP08551 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
NeflP08551 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
NeflP08551 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
NeflP08551 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
NeflP08551 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NeflP08551 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
NeflP08551 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC29.97■■■□□ 2.39
NeflP08551 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NeflP08551 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
NeflP08551 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
NeflP08551 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
NeflP08551 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.96■■■□□ 2.39
NeflP08551 Zfp131-205ENSMUST00000223812 663 ntBASIC29.96■■■□□ 2.39
NeflP08551 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.96■■■□□ 2.39
NeflP08551 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
NeflP08551 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
NeflP08551 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
NeflP08551 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
NeflP08551 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
NeflP08551 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
NeflP08551 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NeflP08551 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
NeflP08551 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
NeflP08551 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NeflP08551 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
NeflP08551 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
NeflP08551 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
NeflP08551 Il17rd-202ENSMUST00000223942 2186 ntBASIC29.9■■■□□ 2.38
NeflP08551 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NeflP08551 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
NeflP08551 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC29.9■■■□□ 2.38
NeflP08551 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.89■■■□□ 2.38
NeflP08551 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.89■■■□□ 2.38
NeflP08551 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NeflP08551 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
NeflP08551 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NeflP08551 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
NeflP08551 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
NeflP08551 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
NeflP08551 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NeflP08551 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NeflP08551 Gm37847-201ENSMUST00000192163 1497 ntBASIC29.86■■■□□ 2.37
NeflP08551 Gm31748-201ENSMUST00000194938 1497 ntBASIC29.86■■■□□ 2.37
NeflP08551 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC29.85■■■□□ 2.37
NeflP08551 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.84■■■□□ 2.37
NeflP08551 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.83■■■□□ 2.37
NeflP08551 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NeflP08551 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NeflP08551 Gm24970-201ENSMUST00000175582 82 ntBASIC29.83■■■□□ 2.37
NeflP08551 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
NeflP08551 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NeflP08551 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
NeflP08551 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
NeflP08551 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NeflP08551 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
NeflP08551 Gm9397-201ENSMUST00000200125 605 ntBASIC29.81■■■□□ 2.36
NeflP08551 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
NeflP08551 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
NeflP08551 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC29.8■■■□□ 2.36
NeflP08551 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
NeflP08551 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
NeflP08551 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
NeflP08551 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NeflP08551 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NeflP08551 Particl-201ENSMUST00000205370 1560 ntBASIC29.78■■■□□ 2.36
NeflP08551 Gm30023-201ENSMUST00000197970 889 ntBASIC29.78■■■□□ 2.36
NeflP08551 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NeflP08551 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NeflP08551 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
NeflP08551 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NeflP08551 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.75■■■□□ 2.35
NeflP08551 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
NeflP08551 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.73■■■□□ 2.35
NeflP08551 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NeflP08551 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NeflP08551 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NeflP08551 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
NeflP08551 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
NeflP08551 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NeflP08551 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NeflP08551 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC29.7■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms