Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cd74P04441 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd74P04441 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cd74P04441 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd74P04441 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd74P04441 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Cd74P04441 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd74P04441 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd74P04441 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd74P04441 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd74P04441 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.28■□□□□ 0.68
Cd74P04441 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cd74P04441 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd74P04441 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd74P04441 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cd74P04441 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd74P04441 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cd74P04441 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cd74P04441 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.26■□□□□ 0.67
Cd74P04441 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd74P04441 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cd74P04441 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cd74P04441 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cd74P04441 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cd74P04441 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
Cd74P04441 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd74P04441 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.24■□□□□ 0.67
Cd74P04441 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd74P04441 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd74P04441 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd74P04441 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd74P04441 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cd74P04441 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd74P04441 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd74P04441 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd74P04441 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.2■□□□□ 0.66
Cd74P04441 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd74P04441 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cd74P04441 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.2■□□□□ 0.66
Cd74P04441 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.2■□□□□ 0.66
Cd74P04441 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd74P04441 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd74P04441 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd74P04441 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd74P04441 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd74P04441 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd74P04441 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd74P04441 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd74P04441 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cd74P04441 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd74P04441 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.18■□□□□ 0.66
Cd74P04441 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd74P04441 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd74P04441 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd74P04441 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Cd74P04441 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.18■□□□□ 0.66
Cd74P04441 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd74P04441 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cd74P04441 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.17■□□□□ 0.66
Cd74P04441 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cd74P04441 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd74P04441 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.16■□□□□ 0.66
Cd74P04441 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cd74P04441 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd74P04441 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd74P04441 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cd74P04441 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cd74P04441 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cd74P04441 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cd74P04441 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cd74P04441 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cd74P04441 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd74P04441 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.13■□□□□ 0.65
Cd74P04441 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd74P04441 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.12■□□□□ 0.65
Cd74P04441 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.12■□□□□ 0.65
Cd74P04441 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd74P04441 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd74P04441 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cd74P04441 Gm30023-201ENSMUST00000197970 889 ntBASIC19.11■□□□□ 0.65
Cd74P04441 Particl-201ENSMUST00000205370 1560 ntBASIC19.1■□□□□ 0.65
Cd74P04441 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd74P04441 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Cd74P04441 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd74P04441 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cd74P04441 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.1■□□□□ 0.65
Cd74P04441 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cd74P04441 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd74P04441 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cd74P04441 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd74P04441 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.08■□□□□ 0.65
Cd74P04441 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd74P04441 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.08■□□□□ 0.64
Cd74P04441 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd74P04441 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd74P04441 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd74P04441 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd74P04441 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd74P04441 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cd74P04441 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms