Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ifna1P01572 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.53■□□□□ 0.72
Ifna1P01572 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ifna1P01572 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ifna1P01572 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ifna1P01572 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ifna1P01572 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ifna1P01572 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.52■□□□□ 0.72
Ifna1P01572 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ifna1P01572 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ifna1P01572 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ifna1P01572 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.51■□□□□ 0.71
Ifna1P01572 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.51■□□□□ 0.71
Ifna1P01572 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ifna1P01572 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ifna1P01572 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ifna1P01572 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ifna1P01572 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ifna1P01572 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ifna1P01572 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ifna1P01572 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ifna1P01572 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.48■□□□□ 0.71
Ifna1P01572 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ifna1P01572 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ifna1P01572 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ifna1P01572 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ifna1P01572 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ifna1P01572 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ifna1P01572 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ifna1P01572 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.46■□□□□ 0.71
Ifna1P01572 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ifna1P01572 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna1P01572 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna1P01572 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna1P01572 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.45■□□□□ 0.7
Ifna1P01572 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna1P01572 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.45■□□□□ 0.7
Ifna1P01572 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna1P01572 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna1P01572 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ifna1P01572 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ifna1P01572 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.44■□□□□ 0.7
Ifna1P01572 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Ifna1P01572 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.42■□□□□ 0.7
Ifna1P01572 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.42■□□□□ 0.7
Ifna1P01572 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ifna1P01572 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ifna1P01572 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ifna1P01572 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ifna1P01572 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.42■□□□□ 0.7
Ifna1P01572 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Ifna1P01572 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifna1P01572 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifna1P01572 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna1P01572 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna1P01572 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna1P01572 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna1P01572 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna1P01572 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Ifna1P01572 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.39■□□□□ 0.69
Ifna1P01572 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifna1P01572 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ifna1P01572 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ifna1P01572 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.38■□□□□ 0.69
Ifna1P01572 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifna1P01572 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Ifna1P01572 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifna1P01572 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifna1P01572 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ifna1P01572 Particl-201ENSMUST00000205370 1560 ntBASIC19.37■□□□□ 0.69
Ifna1P01572 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Ifna1P01572 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifna1P01572 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifna1P01572 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ifna1P01572 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ifna1P01572 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifna1P01572 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ifna1P01572 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ifna1P01572 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.35■□□□□ 0.69
Ifna1P01572 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ifna1P01572 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ifna1P01572 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifna1P01572 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.34■□□□□ 0.69
Ifna1P01572 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifna1P01572 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.33■□□□□ 0.69
Ifna1P01572 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ifna1P01572 Gm30023-201ENSMUST00000197970 889 ntBASIC19.33■□□□□ 0.68
Ifna1P01572 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ifna1P01572 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ifna1P01572 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ifna1P01572 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna1P01572 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.32■□□□□ 0.68
Ifna1P01572 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna1P01572 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna1P01572 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna1P01572 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna1P01572 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ifna1P01572 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifna1P01572 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ifna1P01572 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms