Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.7■■□□□ 1.06
Col5a1O88207 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a1O88207 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Col5a1O88207 Gm5812-201ENSMUST00000061073 957 ntBASIC21.69■■□□□ 1.06
Col5a1O88207 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Col5a1O88207 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.68■■□□□ 1.06
Col5a1O88207 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col5a1O88207 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Col5a1O88207 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Col5a1O88207 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Col5a1O88207 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.66■■□□□ 1.06
Col5a1O88207 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Col5a1O88207 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Col5a1O88207 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Col5a1O88207 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.65■■□□□ 1.06
Col5a1O88207 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
Col5a1O88207 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.65■■□□□ 1.06
Col5a1O88207 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.64■■□□□ 1.06
Col5a1O88207 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Col5a1O88207 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Col5a1O88207 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a1O88207 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a1O88207 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Col5a1O88207 Gm45364-201ENSMUST00000210883 159 ntBASIC21.61■■□□□ 1.05
Col5a1O88207 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a1O88207 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a1O88207 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a1O88207 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Col5a1O88207 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.6■■□□□ 1.05
Col5a1O88207 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col5a1O88207 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Col5a1O88207 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Col5a1O88207 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col5a1O88207 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.58■■□□□ 1.05
Col5a1O88207 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col5a1O88207 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Col5a1O88207 Gm37136-201ENSMUST00000194368 194 ntBASIC21.57■■□□□ 1.04
Col5a1O88207 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a1O88207 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a1O88207 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a1O88207 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.56■■□□□ 1.04
Col5a1O88207 Amer2-203ENSMUST00000225247 2662 ntBASIC21.55■■□□□ 1.04
Col5a1O88207 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a1O88207 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.55■■□□□ 1.04
Col5a1O88207 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a1O88207 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Col5a1O88207 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a1O88207 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.54■■□□□ 1.04
Col5a1O88207 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a1O88207 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a1O88207 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col5a1O88207 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.52■■□□□ 1.04
Col5a1O88207 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.52■■□□□ 1.04
Col5a1O88207 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col5a1O88207 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col5a1O88207 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Col5a1O88207 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a1O88207 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.51■■□□□ 1.03
Col5a1O88207 Mir3960-201ENSMUST00000198213 73 ntBASIC21.5■■□□□ 1.03
Col5a1O88207 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Col5a1O88207 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col5a1O88207 Gm14523-201ENSMUST00000117260 558 ntBASIC21.48■■□□□ 1.03
Col5a1O88207 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col5a1O88207 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Col5a1O88207 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Col5a1O88207 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Col5a1O88207 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Col5a1O88207 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.45■■□□□ 1.03
Col5a1O88207 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Col5a1O88207 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Col5a1O88207 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col5a1O88207 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.44■■□□□ 1.02
Col5a1O88207 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.44■■□□□ 1.02
Col5a1O88207 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Col5a1O88207 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col5a1O88207 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col5a1O88207 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Col5a1O88207 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col5a1O88207 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.43■■□□□ 1.02
Col5a1O88207 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Col5a1O88207 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col5a1O88207 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.43■■□□□ 1.02
Col5a1O88207 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Col5a1O88207 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col5a1O88207 Gm5921-201ENSMUST00000075898 882 ntBASIC21.41■■□□□ 1.02
Col5a1O88207 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col5a1O88207 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col5a1O88207 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.41■■□□□ 1.02
Col5a1O88207 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col5a1O88207 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Col5a1O88207 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col5a1O88207 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col5a1O88207 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.39■■□□□ 1.02
Col5a1O88207 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a1O88207 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a1O88207 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a1O88207 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col5a1O88207 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a1O88207 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a1O88207 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms