Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Matn3O35701 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Matn3O35701 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Matn3O35701 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Matn3O35701 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Matn3O35701 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Matn3O35701 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Matn3O35701 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.1■□□□□ 0.97
Matn3O35701 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Matn3O35701 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Matn3O35701 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Matn3O35701 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Matn3O35701 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Matn3O35701 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Matn3O35701 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Matn3O35701 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Matn3O35701 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Matn3O35701 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Matn3O35701 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Matn3O35701 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Matn3O35701 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Matn3O35701 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Matn3O35701 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Matn3O35701 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Matn3O35701 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.06■□□□□ 0.96
Matn3O35701 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Matn3O35701 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Matn3O35701 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Matn3O35701 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Matn3O35701 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.06■□□□□ 0.96
Matn3O35701 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Matn3O35701 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Matn3O35701 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Matn3O35701 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Matn3O35701 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.05■□□□□ 0.96
Matn3O35701 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Matn3O35701 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Matn3O35701 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Matn3O35701 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Matn3O35701 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Matn3O35701 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Matn3O35701 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Matn3O35701 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Matn3O35701 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.04■□□□□ 0.96
Matn3O35701 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Matn3O35701 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Matn3O35701 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Matn3O35701 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Matn3O35701 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Matn3O35701 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Matn3O35701 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Matn3O35701 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Matn3O35701 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Matn3O35701 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Matn3O35701 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21■□□□□ 0.95
Matn3O35701 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Matn3O35701 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Matn3O35701 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21■□□□□ 0.95
Matn3O35701 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Matn3O35701 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Matn3O35701 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Matn3O35701 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Matn3O35701 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.98■□□□□ 0.95
Matn3O35701 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Matn3O35701 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Matn3O35701 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Matn3O35701 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Matn3O35701 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Matn3O35701 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Matn3O35701 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Matn3O35701 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Matn3O35701 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Matn3O35701 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Matn3O35701 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Matn3O35701 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Matn3O35701 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Matn3O35701 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Matn3O35701 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Matn3O35701 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Matn3O35701 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Matn3O35701 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Matn3O35701 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Matn3O35701 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Matn3O35701 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Matn3O35701 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Matn3O35701 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Matn3O35701 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Matn3O35701 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.93■□□□□ 0.94
Matn3O35701 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Matn3O35701 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Matn3O35701 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Matn3O35701 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Matn3O35701 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Matn3O35701 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.91■□□□□ 0.94
Matn3O35701 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.91■□□□□ 0.94
Matn3O35701 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Matn3O35701 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Matn3O35701 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Matn3O35701 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Matn3O35701 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms