Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pkd1O08852 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.4■□□□□ 0.06
Pkd1O08852 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pkd1O08852 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pkd1O08852 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.39■□□□□ 0.05
Pkd1O08852 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pkd1O08852 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pkd1O08852 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.38■□□□□ 0.05
Pkd1O08852 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Pkd1O08852 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pkd1O08852 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pkd1O08852 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pkd1O08852 Gm15546-201ENSMUST00000122095 826 ntBASIC15.37■□□□□ 0.05
Pkd1O08852 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.37■□□□□ 0.05
Pkd1O08852 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pkd1O08852 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pkd1O08852 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pkd1O08852 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC15.36■□□□□ 0.05
Pkd1O08852 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.36■□□□□ 0.05
Pkd1O08852 Gm9812-201ENSMUST00000061934 968 ntBASIC15.36■□□□□ 0.05
Pkd1O08852 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.36■□□□□ 0.05
Pkd1O08852 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pkd1O08852 Gm10420-201ENSMUST00000121713 882 ntBASIC15.35■□□□□ 0.05
Pkd1O08852 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.35■□□□□ 0.05
Pkd1O08852 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.35■□□□□ 0.05
Pkd1O08852 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pkd1O08852 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pkd1O08852 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pkd1O08852 Gm9905-201ENSMUST00000065740 1845 ntBASIC15.34■□□□□ 0.05
Pkd1O08852 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pkd1O08852 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pkd1O08852 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pkd1O08852 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pkd1O08852 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pkd1O08852 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pkd1O08852 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1O08852 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1O08852 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.32■□□□□ 0.04
Pkd1O08852 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1O08852 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.32■□□□□ 0.04
Pkd1O08852 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1O08852 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1O08852 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1O08852 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.31■□□□□ 0.04
Pkd1O08852 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1O08852 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1O08852 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1O08852 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1O08852 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.3■□□□□ 0.04
Pkd1O08852 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pkd1O08852 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1O08852 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1O08852 Gm37136-201ENSMUST00000194368 194 ntBASIC15.3■□□□□ 0.04
Pkd1O08852 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1O08852 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.29■□□□□ 0.04
Pkd1O08852 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.29■□□□□ 0.04
Pkd1O08852 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pkd1O08852 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1O08852 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1O08852 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1O08852 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1O08852 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.29■□□□□ 0.04
Pkd1O08852 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pkd1O08852 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC15.28■□□□□ 0.04
Pkd1O08852 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pkd1O08852 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pkd1O08852 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pkd1O08852 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pkd1O08852 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pkd1O08852 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pkd1O08852 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC15.27■□□□□ 0.04
Pkd1O08852 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pkd1O08852 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pkd1O08852 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pkd1O08852 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.27■□□□□ 0.03
Pkd1O08852 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pkd1O08852 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pkd1O08852 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pkd1O08852 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pkd1O08852 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.26■□□□□ 0.03
Pkd1O08852 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pkd1O08852 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Pkd1O08852 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pkd1O08852 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.25■□□□□ 0.03
Pkd1O08852 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pkd1O08852 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pkd1O08852 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pkd1O08852 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Pkd1O08852 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC15.24■□□□□ 0.03
Pkd1O08852 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.23■□□□□ 0.03
Pkd1O08852 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pkd1O08852 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1O08852 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1O08852 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
Pkd1O08852 Gm13238-201ENSMUST00000117655 780 ntBASIC15.22■□□□□ 0.03
Pkd1O08852 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1O08852 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.22■□□□□ 0.03
Pkd1O08852 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.22■□□□□ 0.03
Pkd1O08852 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1O08852 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms