Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.41
Ercc2O08811 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.88■■□□□ 1.41
Ercc2O08811 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.88■■□□□ 1.41
Ercc2O08811 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Ercc2O08811 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.87■■□□□ 1.41
Ercc2O08811 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ercc2O08811 Gm37136-201ENSMUST00000194368 194 ntBASIC23.86■■□□□ 1.41
Ercc2O08811 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.85■■□□□ 1.41
Ercc2O08811 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ercc2O08811 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ercc2O08811 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ercc2O08811 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ercc2O08811 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ercc2O08811 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.84■■□□□ 1.41
Ercc2O08811 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
Ercc2O08811 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ercc2O08811 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ercc2O08811 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ercc2O08811 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ercc2O08811 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ercc2O08811 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Ercc2O08811 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ercc2O08811 Gm7432-201ENSMUST00000210343 879 ntBASIC23.81■■□□□ 1.4
Ercc2O08811 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ercc2O08811 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ercc2O08811 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ercc2O08811 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ercc2O08811 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ercc2O08811 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ercc2O08811 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ercc2O08811 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ercc2O08811 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
Ercc2O08811 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ercc2O08811 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ercc2O08811 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ercc2O08811 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ercc2O08811 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ercc2O08811 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ercc2O08811 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ercc2O08811 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ercc2O08811 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ercc2O08811 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ercc2O08811 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.75■■□□□ 1.39
Ercc2O08811 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ercc2O08811 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ercc2O08811 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ercc2O08811 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ercc2O08811 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ercc2O08811 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ercc2O08811 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ercc2O08811 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.73■■□□□ 1.39
Ercc2O08811 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ercc2O08811 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ercc2O08811 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ercc2O08811 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ercc2O08811 Gm11599-201ENSMUST00000118720 878 ntBASIC23.71■■□□□ 1.39
Ercc2O08811 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ercc2O08811 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ercc2O08811 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
Ercc2O08811 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.7■■□□□ 1.38
Ercc2O08811 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ercc2O08811 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ercc2O08811 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Ercc2O08811 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ercc2O08811 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ercc2O08811 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ercc2O08811 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ercc2O08811 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ercc2O08811 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ercc2O08811 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ercc2O08811 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ercc2O08811 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ercc2O08811 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ercc2O08811 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ercc2O08811 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ercc2O08811 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ercc2O08811 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ercc2O08811 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ercc2O08811 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ercc2O08811 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ercc2O08811 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ercc2O08811 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Ercc2O08811 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ercc2O08811 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ercc2O08811 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ercc2O08811 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ercc2O08811 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ercc2O08811 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.6■■□□□ 1.37
Ercc2O08811 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Ercc2O08811 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ercc2O08811 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ercc2O08811 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ercc2O08811 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
Ercc2O08811 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Ercc2O08811 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ercc2O08811 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.58■■□□□ 1.37
Ercc2O08811 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.58■■□□□ 1.36
Ercc2O08811 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ercc2O08811 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ercc2O08811 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms