Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
B020004C17RikJ3QP07 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 Gm14523-201ENSMUST00000117260 558 ntBASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
B020004C17RikJ3QP07 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
B020004C17RikJ3QP07 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
B020004C17RikJ3QP07 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
B020004C17RikJ3QP07 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
B020004C17RikJ3QP07 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.83■■□□□ 1.89
B020004C17RikJ3QP07 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
B020004C17RikJ3QP07 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
B020004C17RikJ3QP07 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.8■■□□□ 1.88
B020004C17RikJ3QP07 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
B020004C17RikJ3QP07 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
B020004C17RikJ3QP07 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
B020004C17RikJ3QP07 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
B020004C17RikJ3QP07 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.77■■□□□ 1.88
B020004C17RikJ3QP07 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
B020004C17RikJ3QP07 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.88
B020004C17RikJ3QP07 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
B020004C17RikJ3QP07 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
B020004C17RikJ3QP07 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
B020004C17RikJ3QP07 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
B020004C17RikJ3QP07 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
B020004C17RikJ3QP07 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.72■■□□□ 1.87
B020004C17RikJ3QP07 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
B020004C17RikJ3QP07 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
B020004C17RikJ3QP07 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Zxda-201ENSMUST00000117281 2621 ntBASIC26.69■■□□□ 1.86
B020004C17RikJ3QP07 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
B020004C17RikJ3QP07 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
B020004C17RikJ3QP07 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
B020004C17RikJ3QP07 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
B020004C17RikJ3QP07 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
B020004C17RikJ3QP07 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
B020004C17RikJ3QP07 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.65■■□□□ 1.86
B020004C17RikJ3QP07 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
B020004C17RikJ3QP07 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
B020004C17RikJ3QP07 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.64■■□□□ 1.86
B020004C17RikJ3QP07 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
B020004C17RikJ3QP07 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.63■■□□□ 1.85
B020004C17RikJ3QP07 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
B020004C17RikJ3QP07 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
B020004C17RikJ3QP07 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
B020004C17RikJ3QP07 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
B020004C17RikJ3QP07 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC26.61■■□□□ 1.85
B020004C17RikJ3QP07 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
B020004C17RikJ3QP07 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
B020004C17RikJ3QP07 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
B020004C17RikJ3QP07 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC26.59■■□□□ 1.85
B020004C17RikJ3QP07 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
B020004C17RikJ3QP07 Gm10420-201ENSMUST00000121713 882 ntBASIC26.58■■□□□ 1.85
B020004C17RikJ3QP07 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
B020004C17RikJ3QP07 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
B020004C17RikJ3QP07 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
B020004C17RikJ3QP07 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
B020004C17RikJ3QP07 Terc-201ENSMUST00000082862 423 ntBASIC26.55■■□□□ 1.84
B020004C17RikJ3QP07 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
B020004C17RikJ3QP07 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
B020004C17RikJ3QP07 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.54■■□□□ 1.84
B020004C17RikJ3QP07 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
B020004C17RikJ3QP07 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
B020004C17RikJ3QP07 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
B020004C17RikJ3QP07 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
B020004C17RikJ3QP07 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
B020004C17RikJ3QP07 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 969.5 ms