Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Shisa8J3QNX5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Shisa8J3QNX5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shisa8J3QNX5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shisa8J3QNX5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shisa8J3QNX5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.16■□□□□ 0.98
Shisa8J3QNX5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Shisa8J3QNX5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Shisa8J3QNX5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Shisa8J3QNX5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shisa8J3QNX5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Shisa8J3QNX5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shisa8J3QNX5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shisa8J3QNX5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Shisa8J3QNX5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Shisa8J3QNX5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Shisa8J3QNX5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shisa8J3QNX5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Shisa8J3QNX5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Shisa8J3QNX5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Shisa8J3QNX5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Shisa8J3QNX5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shisa8J3QNX5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.11■□□□□ 0.97
Shisa8J3QNX5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Shisa8J3QNX5 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.1■□□□□ 0.97
Shisa8J3QNX5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Shisa8J3QNX5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.1■□□□□ 0.97
Shisa8J3QNX5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Shisa8J3QNX5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Shisa8J3QNX5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.09■□□□□ 0.97
Shisa8J3QNX5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa8J3QNX5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shisa8J3QNX5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shisa8J3QNX5 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.08■□□□□ 0.97
Shisa8J3QNX5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shisa8J3QNX5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Shisa8J3QNX5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shisa8J3QNX5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa8J3QNX5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa8J3QNX5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa8J3QNX5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Shisa8J3QNX5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shisa8J3QNX5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shisa8J3QNX5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa8J3QNX5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shisa8J3QNX5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shisa8J3QNX5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Shisa8J3QNX5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shisa8J3QNX5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shisa8J3QNX5 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.01■□□□□ 0.95
Shisa8J3QNX5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa8J3QNX5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shisa8J3QNX5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shisa8J3QNX5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shisa8J3QNX5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Shisa8J3QNX5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.99■□□□□ 0.95
Shisa8J3QNX5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa8J3QNX5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa8J3QNX5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shisa8J3QNX5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Shisa8J3QNX5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa8J3QNX5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.97■□□□□ 0.95
Shisa8J3QNX5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.97■□□□□ 0.95
Shisa8J3QNX5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Shisa8J3QNX5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shisa8J3QNX5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.96■□□□□ 0.95
Shisa8J3QNX5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shisa8J3QNX5 Gm30023-201ENSMUST00000197970 889 ntBASIC20.96■□□□□ 0.95
Shisa8J3QNX5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa8J3QNX5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa8J3QNX5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa8J3QNX5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shisa8J3QNX5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Shisa8J3QNX5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa8J3QNX5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shisa8J3QNX5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.94■□□□□ 0.94
Shisa8J3QNX5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms