Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm21788J3QNH3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm21788J3QNH3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm21788J3QNH3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm21788J3QNH3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm21788J3QNH3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm21788J3QNH3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Gm21788J3QNH3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm21788J3QNH3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.57■□□□□ 0.72
Gm21788J3QNH3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Gm21788J3QNH3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm21788J3QNH3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm21788J3QNH3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm21788J3QNH3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
Gm21788J3QNH3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm21788J3QNH3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm21788J3QNH3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gm21788J3QNH3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm21788J3QNH3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm21788J3QNH3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm21788J3QNH3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Gm21788J3QNH3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm21788J3QNH3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm21788J3QNH3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm21788J3QNH3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm21788J3QNH3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm21788J3QNH3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm21788J3QNH3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm21788J3QNH3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gm21788J3QNH3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Gm21788J3QNH3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Gm21788J3QNH3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gm21788J3QNH3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm21788J3QNH3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Gm21788J3QNH3 Nkain2-201ENSMUST00000092602 558 ntBASIC19.52■□□□□ 0.72
Gm21788J3QNH3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm21788J3QNH3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm21788J3QNH3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm21788J3QNH3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm21788J3QNH3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm21788J3QNH3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm21788J3QNH3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm21788J3QNH3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gm21788J3QNH3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm21788J3QNH3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Gm21788J3QNH3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21788J3QNH3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21788J3QNH3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21788J3QNH3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21788J3QNH3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21788J3QNH3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm21788J3QNH3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm21788J3QNH3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm21788J3QNH3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm21788J3QNH3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm21788J3QNH3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.46■□□□□ 0.71
Gm21788J3QNH3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.46■□□□□ 0.71
Gm21788J3QNH3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Gm21788J3QNH3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm21788J3QNH3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.45■□□□□ 0.7
Gm21788J3QNH3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm21788J3QNH3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gm21788J3QNH3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm21788J3QNH3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm21788J3QNH3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm21788J3QNH3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Gm21788J3QNH3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm21788J3QNH3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.43■□□□□ 0.7
Gm21788J3QNH3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm21788J3QNH3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm21788J3QNH3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm21788J3QNH3 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.42■□□□□ 0.7
Gm21788J3QNH3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm21788J3QNH3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm21788J3QNH3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm21788J3QNH3 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.42■□□□□ 0.7
Gm21788J3QNH3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm21788J3QNH3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm21788J3QNH3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm21788J3QNH3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm21788J3QNH3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm21788J3QNH3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm21788J3QNH3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gm21788J3QNH3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21788J3QNH3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21788J3QNH3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21788J3QNH3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Gm21788J3QNH3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21788J3QNH3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gm21788J3QNH3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21788J3QNH3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21788J3QNH3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21788J3QNH3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21788J3QNH3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gm21788J3QNH3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gm21788J3QNH3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm21788J3QNH3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.37■□□□□ 0.69
Gm21788J3QNH3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.36■□□□□ 0.69
Gm21788J3QNH3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gm21788J3QNH3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms