Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm6408J3QNG1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm6408J3QNG1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm6408J3QNG1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Gm6408J3QNG1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Gm6408J3QNG1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Gm6408J3QNG1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm6408J3QNG1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Gm6408J3QNG1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Gm6408J3QNG1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gm6408J3QNG1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Gm6408J3QNG1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Gm6408J3QNG1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Gm6408J3QNG1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Gm6408J3QNG1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gm6408J3QNG1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gm6408J3QNG1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm6408J3QNG1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.12■■□□□ 1.29
Gm6408J3QNG1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Gm6408J3QNG1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Gm6408J3QNG1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Gm6408J3QNG1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm6408J3QNG1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Gm6408J3QNG1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.1■■□□□ 1.29
Gm6408J3QNG1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
Gm6408J3QNG1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Gm6408J3QNG1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Gm6408J3QNG1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Gm6408J3QNG1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.09■■□□□ 1.29
Gm6408J3QNG1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Gm6408J3QNG1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm6408J3QNG1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm6408J3QNG1 Nkain2-201ENSMUST00000092602 558 ntBASIC23.08■■□□□ 1.29
Gm6408J3QNG1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Gm6408J3QNG1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.08■■□□□ 1.28
Gm6408J3QNG1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Gm6408J3QNG1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Gm6408J3QNG1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Gm6408J3QNG1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm6408J3QNG1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Gm6408J3QNG1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm6408J3QNG1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Gm6408J3QNG1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm6408J3QNG1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm6408J3QNG1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm6408J3QNG1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Gm6408J3QNG1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Gm6408J3QNG1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Gm6408J3QNG1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.04■■□□□ 1.28
Gm6408J3QNG1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Gm6408J3QNG1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm6408J3QNG1 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.02■■□□□ 1.28
Gm6408J3QNG1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Gm6408J3QNG1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Gm6408J3QNG1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Gm6408J3QNG1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gm6408J3QNG1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Gm6408J3QNG1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23■■□□□ 1.27
Gm6408J3QNG1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Gm6408J3QNG1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23■■□□□ 1.27
Gm6408J3QNG1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm6408J3QNG1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.99■■□□□ 1.27
Gm6408J3QNG1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Gm6408J3QNG1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gm6408J3QNG1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Gm6408J3QNG1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Gm6408J3QNG1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm6408J3QNG1 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.97■■□□□ 1.27
Gm6408J3QNG1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm6408J3QNG1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Gm6408J3QNG1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm6408J3QNG1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.95■■□□□ 1.26
Gm6408J3QNG1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Gm6408J3QNG1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm6408J3QNG1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Gm6408J3QNG1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm6408J3QNG1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Gm6408J3QNG1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm6408J3QNG1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm6408J3QNG1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Gm6408J3QNG1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm6408J3QNG1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm6408J3QNG1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Gm6408J3QNG1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Gm6408J3QNG1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Gm6408J3QNG1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Gm6408J3QNG1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Gm6408J3QNG1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Gm6408J3QNG1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.91■■□□□ 1.26
Gm6408J3QNG1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Gm6408J3QNG1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Gm6408J3QNG1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Gm6408J3QNG1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms