Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx6-2D3Z4R4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx6-2D3Z4R4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx6-2D3Z4R4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx6-2D3Z4R4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx6-2D3Z4R4 Mipep-204ENSMUST00000225043 1548 ntBASIC18.94■□□□□ 0.62
Nkx6-2D3Z4R4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-2D3Z4R4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-2D3Z4R4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-2D3Z4R4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-2D3Z4R4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-2D3Z4R4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-2D3Z4R4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-2D3Z4R4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-2D3Z4R4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-2D3Z4R4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Nkx6-2D3Z4R4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-2D3Z4R4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-2D3Z4R4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nkx6-2D3Z4R4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-2D3Z4R4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.9■□□□□ 0.62
Nkx6-2D3Z4R4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.9■□□□□ 0.62
Nkx6-2D3Z4R4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nkx6-2D3Z4R4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx6-2D3Z4R4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.89■□□□□ 0.61
Nkx6-2D3Z4R4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Nkx6-2D3Z4R4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-2D3Z4R4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-2D3Z4R4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-2D3Z4R4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nkx6-2D3Z4R4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-2D3Z4R4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-2D3Z4R4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nkx6-2D3Z4R4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-2D3Z4R4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nkx6-2D3Z4R4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-2D3Z4R4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-2D3Z4R4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-2D3Z4R4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-2D3Z4R4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-2D3Z4R4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.85■□□□□ 0.61
Nkx6-2D3Z4R4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-2D3Z4R4 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.85■□□□□ 0.61
Nkx6-2D3Z4R4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-2D3Z4R4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nkx6-2D3Z4R4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nkx6-2D3Z4R4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-2D3Z4R4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-2D3Z4R4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nkx6-2D3Z4R4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-2D3Z4R4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-2D3Z4R4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-2D3Z4R4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nkx6-2D3Z4R4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-2D3Z4R4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-2D3Z4R4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-2D3Z4R4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-2D3Z4R4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx6-2D3Z4R4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx6-2D3Z4R4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Nkx6-2D3Z4R4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-2D3Z4R4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-2D3Z4R4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-2D3Z4R4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx6-2D3Z4R4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Nkx6-2D3Z4R4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx6-2D3Z4R4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-2D3Z4R4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-2D3Z4R4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Nkx6-2D3Z4R4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-2D3Z4R4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx6-2D3Z4R4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx6-2D3Z4R4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
Nkx6-2D3Z4R4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx6-2D3Z4R4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx6-2D3Z4R4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx6-2D3Z4R4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx6-2D3Z4R4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx6-2D3Z4R4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nkx6-2D3Z4R4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Nkx6-2D3Z4R4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx6-2D3Z4R4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx6-2D3Z4R4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms